Package: Xeva 1.29.0
Benjamin Haibe-Kains
Xeva: Analysis of patient-derived xenograft (PDX) data
The Xeva package provides efficient and powerful functions for patient-drived xenograft (PDX) based pharmacogenomic data analysis. This package contains a set of functions to perform analysis of patient-derived xenograft data. This package was developed by the BHKLab, for further information please see our documentation.
Authors:
Xeva_1.29.0.tar.gz
Xeva_1.29.0.zip(r-4.7)Xeva_1.29.0.zip(r-4.6)Xeva_1.29.0.zip(r-4.5)
Xeva_1.29.0.tgz(r-4.6-any)Xeva_1.29.0.tgz(r-4.5-any)
Xeva_1.29.0.tar.gz(r-4.7-any)Xeva_1.29.0.tar.gz(r-4.6-any)
Xeva_1.29.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
Xeva/json (API)
NEWS
| # Install 'Xeva' in R: |
| install.packages('Xeva', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/bhklab/xeva/issues
On BioConductor:Xeva-1.29.0(bioc 3.24)Xeva-1.28.0(bioc 3.23)
geneexpressionpharmacogeneticspharmacogenomicssoftwareclassification
Last updated from:c252c0c2bf. Checks:1 WARNING, 7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 206 | ||
| linux-devel-x86_64 | NOTE | 424 | ||
| source / vignettes | OK | 365 | ||
| linux-release-x86_64 | NOTE | 365 | ||
| macos-release-arm64 | NOTE | 224 | ||
| macos-oldrel-arm64 | NOTE | 243 | ||
| windows-devel | NOTE | 306 | ||
| windows-release | NOTE | 335 | ||
| windows-oldrel | NOTE | 345 | ||
| wasm-release | OK | 170 |
Exports:ABCaddExperimentalDesignangleAUCbatchInfocreateXevaSetdosePlotdownloadXevaSetdrugInformdrugSensitivitySiggetExperimentgetMolecularProfileslmmmodelInfomRECISTplotBatchplotmRECISTplotPDXresponseselectModelIdssensitivitysetResponseslopesubsetXevasummarizeMolecularProfilessummarizeResponseTGIwaterfall
Dependencies:abindbackportsbase64encBBmiscbenchBHBiobaseBiocBaseUtilsBiocGenericsBiocParallelbitopsbootbslibBumpyMatrixcachemcaToolscelestialcheckmatecirclizecliclueclustercodetoolscolorspacecommonmarkComplexHeatmapcoopCoreGxcowplotcpp11crayoncrosstalkdata.tableDelayedArraydigestdoParalleldownloaderdplyrDTevaluatefarverfastmapfastmatchfgseafontawesomeforeachformatRfsfutile.loggerfutile.optionsgenericsGenomicRangesGetoptLongggplot2GlobalOptionsgluegplotsgtablegtoolshighrhtmltoolshtmlwidgetshttpuvigraphIRangesisobanditeratorsjquerylibjsonliteKernSmoothknitrlabelinglambda.rlaterlatticelazyevallifecyclelimmalsamagicaxismagrittrmapprojmapsmarrayMASSMatrixMatrixGenericsmatrixStatsmemoisemimeMultiAssayExperimentNISTunitsnlmeotelPharmacoGxpianopillarpkgconfigplotrixplyrpngpracmaprofmempromisespurrrR6RANNrappdirsRColorBrewerRcpprelationsreshape2rjsonrlangrmarkdownRmiscS4ArraysS4VectorsS7sassscalesSeqinfosetsshapeshinyshinydashboardshinyjsslamsmsnowSnowballCsourcetoolsSparseArraystatmodstringistringrSummarizedExperimenttibbletidyrtidyselecttinytexutf8vctrsviridisLitevisNetworkwithrxfunxtableXVectoryaml
