Package: UNDO 1.55.0

Niya Wang

UNDO: Unsupervised Deconvolution of Tumor-Stromal Mixed Expressions

UNDO is an R package for unsupervised deconvolution of tumor and stromal mixed expression data. It detects marker genes and deconvolutes the mixing expression data without any prior knowledge.

Authors:Niya Wang <[email protected]>

UNDO_1.55.0.tar.gz
UNDO_1.55.0.zip(r-4.7)UNDO_1.55.0.zip(r-4.6)UNDO_1.55.0.zip(r-4.5)
UNDO_1.55.0.tgz(r-4.6-any)UNDO_1.55.0.tgz(r-4.5-any)
UNDO_1.55.0.tar.gz(r-4.7-any)UNDO_1.55.0.tar.gz(r-4.6-any)
UNDO_1.55.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
UNDO/json (API)
NEWS

# Install 'UNDO' in R:
install.packages('UNDO', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On BioConductor:UNDO-1.55.0(bioc 3.24)UNDO-1.54.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

software

4.00 score 8 scripts 418 downloads 5 mentions 6 exports 6 dependencies

Last updated from:69dc913419. Checks:1 ERROR, 9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR124
linux-devel-x86_64OK176
source / vignettesOK136
linux-release-x86_64OK132
macos-release-arm64OK111
macos-oldrel-arm64OK101
windows-develOK83
windows-releaseOK92
windows-oldrelOK87
wasm-releaseOK102

Exports:calc_E1dimension_reductiongene_expression_inputmarker_gene_selectionmixing_matrix_computationtwo_source_deconv

Dependencies:BiobaseBiocGenericsbootgenericsMASSnnls

UNDO Usage

Rendered fromUNDO-vignette.Rnwusingutils::Sweaveon May 29 2026.

Last update: 2014-07-17
Started: 2014-03-20