Package: TreeAndLeaf 1.17.0

Milena A. Cardoso

TreeAndLeaf: Displaying binary trees with focus on dendrogram leaves

The TreeAndLeaf package combines unrooted and force-directed graph algorithms in order to layout binary trees, aiming to represent multiple layers of information onto dendrogram leaves.

Authors:Leonardo W. Kume, Luis E. A. Rizzardi, Milena A. Cardoso, Mauro A. A. Castro

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NEWS

# Install 'TreeAndLeaf' in R:
install.packages('TreeAndLeaf', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • phylo_species - Species metadata from STRING-db v11
  • phylo_tree - Species tree from STRING-db v11
  • spdata - Genome statistics for eukaryotes with complete genome sequence

On BioConductor:TreeAndLeaf-1.17.0(bioc 3.20)TreeAndLeaf-1.16.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

2 exports 0.61 score 24 dependencies

Last updated 2 months agofrom:c3c52f0132

Exports:formatTreetreeAndLeaf

Dependencies:apeclicolorspacecpp11digestfarverglueigraphlabelinglatticelifecyclemagrittrMatrixmunsellnlmepkgconfigR6RColorBrewerRcppRedeRrlangscalesvctrsviridisLite

TreeAndLeaf: A graph layout strategy for binary trees with focus on the leaves

Milena A Cardoso, Luis E A Rizzardi, Leonardo W Kume, Sheyla Trefflich, Clarice Groeneveld, Mauro A A Castro

Rendered fromTreeAndLeaf.Rmdusingknitr::rmarkdownon Jun 17 2024.

Last update: 2021-08-28
Started: 2019-08-20