Package: TargetScore 1.43.0
Yue Li
TargetScore: TargetScore: Infer microRNA targets using microRNA-overexpression data and sequence information
Infer the posterior distributions of microRNA targets by probabilistically modelling the likelihood microRNA-overexpression fold-changes and sequence-based scores. Variaitonal Bayesian Gaussian mixture model (VB-GMM) is applied to log fold-changes and sequence scores to obtain the posteriors of latent variable being the miRNA targets. The final targetScore is computed as the sigmoid-transformed fold-change weighted by the averaged posteriors of target components over all of the features.
Authors:
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TargetScore/json (API)
NEWS
| # Install 'TargetScore' in R: |
| install.packages('TargetScore', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:TargetScore-1.43.0(bioc 3.20)TargetScore-1.42.0(bioc 3.19)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 months agofrom:ca32e071c8
Exports:bsxfun.sedot.extgetTargetScoresinitializationlogmvgammalogsumexpsort_componentstargetScorevbgmmvboundvexpvmax
