Package: SigFuge 1.43.0

Patrick Kimes

SigFuge: SigFuge

Algorithm for testing significance of clustering in RNA-seq data.

Authors:Patrick Kimes, Christopher Cabanski

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SigFuge.pdf |SigFuge.html✨
SigFuge/json (API)

# Install 'SigFuge' in R:
install.packages('SigFuge', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • geneAnnot - CDKN2A gene locus annotation
  • geneDepth - Coverage matrix across CDKN2A gene locus

On BioConductor:SigFuge-1.43.0(bioc 3.20)SigFuge-1.42.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

4 exports 0.91 score 49 dependencies 1 mentions

Last updated 2 months agofrom:2ed6c609e6

Exports:SFfigureSFlabelsSFnormalizeSFpval

Dependencies:askpassBiocGenericsclicolorspacecurlfansifarverGenomeInfoDbGenomeInfoDbDataGenomicRangesggplot2gluegtablehttrIRangesisobandjsonlitelabelinglatticelifecyclemagrittrMASSmatlabMatrixmgcvmimemunsellnlmeopensslpillarpkgconfigplyrR6RColorBrewerRcppreshaperlangS4VectorsscalessigclustsystibbleUCSC.utilsutf8vctrsviridisLitewithrXVectorzlibbioc

SigFuge Tutorial

Rendered fromSigFuge.Rnwusingutils::Sweaveon Jun 27 2024.

Last update: 2014-09-22
Started: 2013-11-01