Package: SMAD 1.29.0

Qingzhou Zhang

SMAD: Statistical Modelling of AP-MS Data (SMAD)

Assigning probability scores to protein interactions captured in affinity purification mass spectrometry (AP-MS) expriments to infer protein-protein interactions. The output would facilitate non-specific background removal as contaminants are commonly found in AP-MS data.

Authors:Qingzhou Zhang [aut, cre]

SMAD_1.29.0.tar.gz
SMAD_1.29.0.zip(r-4.7)SMAD_1.29.0.zip(r-4.6)SMAD_1.29.0.zip(r-4.5)
SMAD_1.29.0.tgz(r-4.6-x86_64)SMAD_1.29.0.tgz(r-4.6-arm64)SMAD_1.29.0.tgz(r-4.5-x86_64)SMAD_1.29.0.tgz(r-4.5-arm64)
SMAD_1.29.0.tar.gz(r-4.7-arm64)SMAD_1.29.0.tar.gz(r-4.7-x86_64)SMAD_1.29.0.tar.gz(r-4.6-arm64)SMAD_1.29.0.tar.gz(r-4.6-x86_64)
SMAD_1.29.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
SMAD/json (API)
NEWS

# Install 'SMAD' in R:

install.packages('SMAD', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/zqzneptune/smad/issues

Uses libs:

c++– GNU Standard C++ Library v3

Datasets:

TestDatInput - Test data for SMAD

On BioConductor:SMAD-1.29.0(bioc 3.24)SMAD-1.28.0(bioc 3.23)

massspectrometry proteomics software cpp

5.38 score 5 scripts 320 downloads 4 mentions 5 exports 24 dependencies

Last updated from:8fa6b2450e. Checks:3 WARNING, 11 OK. Indexed: yes.

Target	Result	Time
bioc-checks	WARNING	164
linux-devel-arm64	WARNING	194
linux-devel-x86_64	OK	194
source / vignettes	OK	187
linux-release-arm64	WARNING	161
linux-release-x86_64	OK	184
macos-release-arm64	OK	107
macos-release-x86_64	OK	249
macos-oldrel-arm64	OK	91
macos-oldrel-x86_64	OK	244
windows-devel	OK	140
windows-release	OK	134
windows-oldrel	OK	134
wasm-release	OK	120