Package: SMAD 1.21.0

Qingzhou Zhang

SMAD: Statistical Modelling of AP-MS Data (SMAD)

Assigning probability scores to protein interactions captured in affinity purification mass spectrometry (AP-MS) expriments to infer protein-protein interactions. The output would facilitate non-specific background removal as contaminants are commonly found in AP-MS data.

Authors:Qingzhou Zhang [aut, cre]

SMAD_1.21.0.tar.gz
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SMAD.pdf |SMAD.html✨
SMAD/json (API)
NEWS

# Install 'SMAD' in R:
install.packages('SMAD', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:

On BioConductor:SMAD-1.21.0(bioc 3.20)SMAD-1.20.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

5 exports 0.61 score 24 dependencies 4 mentions

Last updated 2 months agofrom:84f1bf179a

Exports:CompPASSDICEHartHGPE

Dependencies:clicpp11dplyrfansigenericsgluegmplifecyclemagrittrpillarpkgconfigpurrrR6RcppRcppAlgosrlangstringistringrtibbletidyrtidyselectutf8vctrswithr

SMAD Quick Start

Qingzhou (Johnson) Zhang

Rendered fromquickstart.Rmdusingknitr::rmarkdownon Jun 30 2024.

Last update: 2019-02-13
Started: 2019-02-05