Package: SMAD 1.23.0

Qingzhou Zhang

SMAD: Statistical Modelling of AP-MS Data (SMAD)

Assigning probability scores to protein interactions captured in affinity purification mass spectrometry (AP-MS) expriments to infer protein-protein interactions. The output would facilitate non-specific background removal as contaminants are commonly found in AP-MS data.

Authors:Qingzhou Zhang [aut, cre]

SMAD_1.23.0.tar.gz
SMAD_1.23.0.zip(r-4.5)SMAD_1.23.0.zip(r-4.4)SMAD_1.23.0.zip(r-4.3)
SMAD_1.23.0.tgz(r-4.4-x86_64)SMAD_1.23.0.tgz(r-4.4-arm64)SMAD_1.23.0.tgz(r-4.3-x86_64)SMAD_1.23.0.tgz(r-4.3-arm64)
SMAD_1.23.0.tar.gz(r-4.5-noble)SMAD_1.23.0.tar.gz(r-4.4-noble)
SMAD_1.23.0.tgz(r-4.4-emscripten)SMAD_1.23.0.tgz(r-4.3-emscripten)
SMAD.pdf |SMAD.html✨
SMAD/json (API)
NEWS

# Install 'SMAD' in R:

install.packages('SMAD', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Uses libs:

c++– GNU Standard C++ Library v3

Datasets:

TestDatInput - Test data for SMAD

On BioConductor:SMAD-1.23.0(bioc 3.21)SMAD-1.22.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

massspectrometry proteomics software cpp

4.60 score 3 scripts 161 downloads 4 mentions 5 exports 24 dependencies

Last updated 2 months agofrom:78f48cf72e. Checks:OK: 5 WARNING: 4. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Nov 30 2024
R-4.5-win-x86_64	OK	Nov 30 2024
R-4.5-linux-x86_64	OK	Nov 30 2024
R-4.4-win-x86_64	OK	Nov 30 2024
R-4.4-mac-x86_64	WARNING	Nov 30 2024
R-4.4-mac-aarch64	WARNING	Nov 30 2024
R-4.3-win-x86_64	OK	Nov 30 2024
R-4.3-mac-x86_64	WARNING	Nov 30 2024
R-4.3-mac-aarch64	WARNING	Nov 30 2024