Package: ReadqPCR 1.53.0
James Perkins
ReadqPCR: Read qPCR data
The package provides functions to read raw RT-qPCR data of different platforms.
Authors:
ReadqPCR_1.53.0.tar.gz
ReadqPCR_1.53.0.zip(r-4.5)ReadqPCR_1.53.0.zip(r-4.4)ReadqPCR_1.53.0.zip(r-4.3)
ReadqPCR_1.53.0.tgz(r-4.4-any)ReadqPCR_1.53.0.tgz(r-4.3-any)
ReadqPCR_1.53.0.tar.gz(r-4.5-noble)ReadqPCR_1.53.0.tar.gz(r-4.4-noble)
ReadqPCR_1.53.0.tgz(r-4.4-emscripten)ReadqPCR_1.53.0.tgz(r-4.3-emscripten)
ReadqPCR.pdf |ReadqPCR.html✨
ReadqPCR/json (API)
| # Install 'ReadqPCR' in R: |
| install.packages('ReadqPCR', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:ReadqPCR-1.53.0(bioc 3.21)ReadqPCR-1.52.0(bioc 3.20)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
dataimportmicrotitreplateassaygeneexpressionqpcr
Last updated 2 months agofrom:e70ef539e1. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Dec 17 2024 |
| R-4.5-win | OK | Dec 17 2024 |
| R-4.5-linux | OK | Dec 17 2024 |
| R-4.4-win | OK | Dec 17 2024 |
| R-4.4-mac | OK | Dec 17 2024 |
| R-4.3-win | OK | Dec 17 2024 |
| R-4.3-mac | OK | Dec 17 2024 |
Exports:checkValidqPCRFilenamecheckValidTaqmanFilenameseffseffs<-exprs.well.orderexprs.well.order<-mergeqpcR2CyclesSetread.LC480read.LC480SampleInforead.qPCRread.taqmanse.effsse.effs<-
Dependencies:BiobaseBiocGenericsgenerics
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Read qPCR data | ReadqPCR-package ReadqPCR |
| Class CyclesSet | class:CyclesSet CyclesSet CyclesSet-class exprs,CyclesSet-method exprs<-,CyclesSet-method |
| Generic Function for Merging eSet and AnnotatedDataFrame | merge merge,AnnotatedDataFrame,eSet-method merge,eSet,AnnotatedDataFrame-method merge-methods |
| Transform a dataset from qpcR Package into CyclesSet | qpcR2CyclesSet |
| Class qPCRBatch | class:qPCRBatch effs effs,qPCRBatch-method effs<- effs<-,qPCRBatch-method exprs,qPCRBatch-method exprs.well.order exprs.well.order,qPCRBatch-method exprs.well.order<- exprs.well.order<-,qPCRBatch-method exprs<-,qPCRBatch-method qPCRBatch qPCRBatch-class qSet se.effs se.effs,qPCRBatch-method se.effs<- se.effs<-,qPCRBatch-method se.exprs,qPCRBatch-method se.exprs<-,qPCRBatch-method |
| Read in raw qPCR data of Light Cycler 480 | read.LC480 |
| Read sample information data of a qPCR experiment from Light Cycler 480 | read.LC480SampleInfo |
| Read user formatted qPCR data and produce a qPCRBatch | checkValidqPCRFilename read.qPCR read_qPCRBatch |
| Read Taqman qPCR data and produce a qPCRBatch | checkValidTaqmanFilenames read.taqman read_TaqBatch |
