Package: Qtlizer 1.27.0
Qtlizer: Comprehensive QTL annotation of GWAS results
This R package provides access to the Qtlizer web server. Qtlizer annotates lists of common small variants (mainly SNPs) and genes in humans with associated changes in gene expression using the most comprehensive database of published quantitative trait loci (QTLs).
Authors:
Qtlizer_1.27.0.tar.gz
Qtlizer_1.27.0.zip(r-4.7)Qtlizer_1.27.0.zip(r-4.6)Qtlizer_1.27.0.zip(r-4.5)
Qtlizer_1.27.0.tgz(r-4.6-any)Qtlizer_1.27.0.tgz(r-4.5-any)
Qtlizer_1.27.0.tar.gz(r-4.7-any)Qtlizer_1.27.0.tar.gz(r-4.6-any)
Qtlizer_1.27.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
Qtlizer/json (API)
NEWS
| # Install 'Qtlizer' in R: |
| install.packages('Qtlizer', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/matmu/qtlizer/issues
On BioConductor:Qtlizer-1.27.0(bioc 3.24)Qtlizer-1.26.0(bioc 3.23)
genomewideassociationsnpgeneticslinkagedisequilibriumeqtlgwasvariant-annotation
Last updated from:5c860dc627. Checks:8 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | NOTE | 148 | ||
| linux-devel-x86_64 | NOTE | 149 | ||
| source / vignettes | OK | 178 | ||
| linux-release-x86_64 | NOTE | 173 | ||
| macos-release-arm64 | NOTE | 78 | ||
| macos-oldrel-arm64 | NOTE | 77 | ||
| windows-devel | NOTE | 93 | ||
| windows-release | NOTE | 150 | ||
| windows-oldrel | NOTE | 74 | ||
| wasm-release | OK | 109 |
Exports:get_qtls
Dependencies:askpassBiocGenericscurlgenericsGenomicRangeshttrIRangesjsonlitemimeopensslR6S4VectorsSeqinfostringisys
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Query Qtlizer | get_qtls |
