Package: Qtlizer 1.21.0

Matthias Munz

Qtlizer: Comprehensive QTL annotation of GWAS results

This R package provides access to the Qtlizer web server. Qtlizer annotates lists of common small variants (mainly SNPs) and genes in humans with associated changes in gene expression using the most comprehensive database of published quantitative trait loci (QTLs).

Authors:Matthias Munz [aut, cre], Julia Remes [aut]

Qtlizer_1.21.0.tar.gz
Qtlizer_1.21.0.zip(r-4.5)Qtlizer_1.21.0.zip(r-4.4)Qtlizer_1.21.0.zip(r-4.3)
Qtlizer_1.21.0.tgz(r-4.4-any)Qtlizer_1.21.0.tgz(r-4.3-any)
Qtlizer_1.21.0.tar.gz(r-4.5-noble)Qtlizer_1.21.0.tar.gz(r-4.4-noble)
Qtlizer_1.21.0.tgz(r-4.4-emscripten)Qtlizer_1.21.0.tgz(r-4.3-emscripten)
Qtlizer.pdf |Qtlizer.html
Qtlizer/json (API)
NEWS

# Install 'Qtlizer' in R:
install.packages('Qtlizer', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/matmu/qtlizer/issues

On BioConductor:Qtlizer-1.21.0(bioc 3.21)Qtlizer-1.20.0(bioc 3.20)

genomewideassociationsnpgeneticslinkagedisequilibriumeqtlgwasvariant-annotation

4.38 score 3 stars 2 scripts 144 downloads 4 mentions 1 exports 19 dependencies

Last updated 2 months agofrom:c7fbceb4ee. Checks:ERROR: 7. Indexed: yes.

TargetResultDate
Doc / VignettesFAILNov 30 2024
R-4.5-winERRORNov 30 2024
R-4.5-linuxERRORNov 30 2024
R-4.4-winERRORNov 30 2024
R-4.4-macERRORNov 30 2024
R-4.3-winERRORNov 30 2024
R-4.3-macERRORNov 30 2024

Exports:get_qtls

Dependencies:askpassBiocGenericscurlgenericsGenomeInfoDbGenomeInfoDbDataGenomicRangeshttrIRangesjsonlitemimeopensslR6S4VectorsstringisysUCSC.utilsXVectorzlibbioc