Package: Qtlizer 1.21.1

Matthias Munz

Qtlizer: Comprehensive QTL annotation of GWAS results

This R package provides access to the Qtlizer web server. Qtlizer annotates lists of common small variants (mainly SNPs) and genes in humans with associated changes in gene expression using the most comprehensive database of published quantitative trait loci (QTLs).

Authors:Matthias Munz [aut, cre], Julia Remes [aut]

Qtlizer_1.21.1.tar.gz
Qtlizer_1.21.1.zip(r-4.5)Qtlizer_1.21.1.zip(r-4.4)Qtlizer_1.21.1.zip(r-4.3)
Qtlizer_1.21.1.tgz(r-4.5-any)Qtlizer_1.21.1.tgz(r-4.4-any)Qtlizer_1.21.1.tgz(r-4.3-any)
Qtlizer_1.21.1.tar.gz(r-4.5-noble)Qtlizer_1.21.1.tar.gz(r-4.4-noble)
Qtlizer_1.21.1.tgz(r-4.4-emscripten)Qtlizer_1.21.1.tgz(r-4.3-emscripten)
Qtlizer.pdf |Qtlizer.html
Qtlizer/json (API)
NEWS

# Install 'Qtlizer' in R:
install.packages('Qtlizer', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/matmu/qtlizer/issues

On BioConductor:Qtlizer-1.21.0(bioc 3.21)Qtlizer-1.20.0(bioc 3.20)

genomewideassociationsnpgeneticslinkagedisequilibriumeqtlgwasvariant-annotation

5.73 score 3 stars 2 scripts 228 downloads 4 mentions 1 exports 18 dependencies

Last updated 29 days agofrom:84ff30dc49. Checks:1 OK, 7 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 01 2025
R-4.5-winNOTEMar 01 2025
R-4.5-macNOTEMar 01 2025
R-4.5-linuxNOTEMar 01 2025
R-4.4-winNOTEMar 01 2025
R-4.4-macNOTEMar 01 2025
R-4.3-winNOTEMar 01 2025
R-4.3-macNOTEMar 01 2025

Exports:get_qtls

Dependencies:askpassBiocGenericscurlgenericsGenomeInfoDbGenomeInfoDbDataGenomicRangeshttrIRangesjsonlitemimeopensslR6S4VectorsstringisysUCSC.utilsXVector

Qtlizer: comprehensive QTL annotation of GWAS results

Rendered fromQtlizer.Rmdusingknitr::rmarkdownon Mar 01 2025.

Last update: 2020-05-11
Started: 2019-06-26