Package: Prostar 1.39.0

Samuel Wieczorek

Prostar: Provides a GUI for DAPAR

This package provides a GUI interface for the DAPAR package. The package Prostar (Proteomics statistical analysis with R) is a Bioconductor distributed R package which provides all the necessary functions to analyze quantitative data from label-free proteomics experiments. Contrarily to most other similar R packages, it is endowed with rich and user-friendly graphical interfaces, so that no programming skill is required.

Authors:Thomas Burger [aut], Florence Combes [aut], Samuel Wieczorek [cre, aut]

Prostar_1.39.0.tar.gz
Prostar_1.39.0.zip(r-4.5)Prostar_1.39.0.zip(r-4.4)
Prostar_1.39.0.tgz(r-4.4-any)
Prostar_1.39.0.tar.gz(r-4.5-noble)Prostar_1.39.0.tar.gz(r-4.4-noble)
Prostar_1.39.0.tgz(r-4.4-emscripten)
Prostar.pdf |Prostar.html✨
Prostar/json (API)
NEWS

# Install 'Prostar' in R:

install.packages('Prostar', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/edyp-lab/prostar/issues

On BioConductor:Prostar-1.39.0(bioc 3.21)Prostar-1.38.1(bioc 3.20)

proteomics massspectrometry normalization preprocessing software gui prostar1

6.65 score 1 stars 15 scripts 250 downloads 10 mentions 3 exports 178 dependencies

Last updated 3 months agofrom:5e60bdd485. Checks:1 OK, 4 NOTE. Indexed: yes.

Target	Result	Latest binary
Doc / Vignettes	OK	Dec 27 2024
R-4.5-win	NOTE	Dec 30 2024
R-4.5-linux	NOTE	Dec 27 2024
R-4.4-win	NOTE	Dec 30 2024
R-4.4-mac	NOTE	Dec 27 2024

Exports:BuildColorStyles getDataForExprs Prostar

Dependencies:abind affy affyio AnnotationFilter askpass assertthat backports base64enc BH Biobase BiocBaseUtils BiocGenerics BiocManager BiocParallel bitops broom bslib cachem callr caTools cli clue cluster codetools colorspace colourpicker commonmark cpp11 crayon crosstalk curl DAPAR DAPARdata data.table DelayedArray digest doParallel dplyr DT evaluate fansi farver fastmap fontawesome foreach formatR fs futile.logger futile.options future generics GenomeInfoDb GenomeInfoDbData GenomicRanges ggplot2 globals glue gplots gtable gtools highcharter highr htmltools htmlwidgets httpuv httr igraph impute IRanges isoband iterators jquerylib jsonlite KernSmooth knitr labeling lambda.r later lattice lazyeval lifecycle limma listenv lubridate magrittr MALDIquant markdown MASS Matrix MatrixGenerics matrixStats memoise mgcv mime miniUI MsCoreUtils MSnbase MultiAssayExperiment munsell mzID mzR ncdf4 nlme openssl parallelly pcaMethods pillar pkgconfig plotly plyr preprocessCore processx promises ProtGenerics ps PSMatch purrr QFeatures quantmod R.methodsS3 R.oo R.utils R6 rappdirs rclipboard RColorBrewer Rcpp reshape2 rhandsontable Rhdf5lib rjson rlang rlist rmarkdown S4Arrays S4Vectors sass scales shiny shinyAce shinyBS shinycssloaders shinyjqui shinyjs shinythemes shinyTree shinyWidgets sm snow sourcetools SparseArray statmod stringi stringr SummarizedExperiment sys tibble tidyr tidyselect timechange tinytex TTR UCSC.utils utf8 vctrs vioplot viridisLite vsn webshot withr xfun XML xtable xts XVector yaml zlibbioc zoo

Prostar user manual

Samuel Wieczorek, Thomas Burger

Rendered fromProstar_UserManual.Rmdusingknitr::rmarkdownon Dec 27 2024.

Last update: 2024-10-06
Started: 2022-06-17

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
xxxx	BuildColorStyles
xxxx	getDataForExprs
Prostar	Prostar