Package: PAIRADISE 1.21.0

Qiang Hu

PAIRADISE: PAIRADISE: Paired analysis of differential isoform expression

This package implements the PAIRADISE procedure for detecting differential isoform expression between matched replicates in paired RNA-Seq data.

Authors:Levon Demirdjian, Ying Nian Wu, Yi Xing

PAIRADISE_1.21.0.tar.gz
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PAIRADISE_1.21.0.tgz(r-4.4-any)PAIRADISE_1.21.0.tgz(r-4.3-any)
PAIRADISE_1.21.0.tar.gz(r-4.5-noble)PAIRADISE_1.21.0.tar.gz(r-4.4-noble)
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PAIRADISE.pdf |PAIRADISE.html✨
PAIRADISE/json (API)

Peer review:

On BioConductor:PAIRADISE-1.21.0(bioc 3.20)PAIRADISE-1.20.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

4 exports 0.71 score 38 dependencies

Last updated 2 months agofrom:abe5ab08c2

Exports:pairadisePDseDataSetPDseDataSetFromMatresults

Dependencies:abindaskpassBHBiobaseBiocGenericsBiocParallelcodetoolscpp11crayoncurlDelayedArrayformatRfutile.loggerfutile.optionsGenomeInfoDbGenomeInfoDbDataGenomicRangeshttrIRangesjsonlitelambda.rlatticeMatrixMatrixGenericsmatrixStatsmimenloptropensslR6S4ArraysS4VectorssnowSparseArraySummarizedExperimentsysUCSC.utilsXVectorzlibbioc