Package: PAIRADISE 1.29.0

Qiang Hu

PAIRADISE: PAIRADISE: Paired analysis of differential isoform expression

This package implements the PAIRADISE procedure for detecting differential isoform expression between matched replicates in paired RNA-Seq data.

Authors:Levon Demirdjian, Ying Nian Wu, Yi Xing

PAIRADISE_1.29.0.tar.gz
PAIRADISE_1.29.0.zip(r-4.7)PAIRADISE_1.29.0.zip(r-4.6)PAIRADISE_1.29.0.zip(r-4.5)
PAIRADISE_1.29.0.tgz(r-4.6-any)PAIRADISE_1.29.0.tgz(r-4.5-any)
PAIRADISE_1.29.0.tar.gz(r-4.7-any)PAIRADISE_1.29.0.tar.gz(r-4.6-any)
PAIRADISE_1.29.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
PAIRADISE/json (API)

# Install 'PAIRADISE' in R:
install.packages('PAIRADISE', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On BioConductor:PAIRADISE-1.29.0(bioc 3.24)PAIRADISE-1.28.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

rnaseqdifferentialexpressionalternativesplicingstatisticalmethodimmunooncology

3.98 score 48 scripts 417 downloads 4 exports 27 dependencies

Last updated from:b7bf738a29. Checks:1 ERROR, 9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR165
linux-devel-x86_64OK279
source / vignettesOK238
linux-release-x86_64OK309
macos-release-arm64OK163
macos-oldrel-arm64OK167
windows-develOK182
windows-releaseOK210
windows-oldrelOK197
wasm-releaseOK133

Exports:pairadisePDseDataSetPDseDataSetFromMatresults

Dependencies:abindBHBiobaseBiocGenericsBiocParallelcodetoolscpp11DelayedArrayformatRfutile.loggerfutile.optionsgenericsGenomicRangesIRangeslambda.rlatticeMatrixMatrixGenericsmatrixStatsnloptrS4ArraysS4VectorsSeqinfosnowSparseArraySummarizedExperimentXVector

PAIRADISE

Qiang Hu

Rendered frompairadise.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2019-01-16
Started: 2018-11-08