Package: NTW 1.55.0

Yuanhua Liu

NTW: Predict gene network using an Ordinary Differential Equation (ODE) based method

This package predicts the gene-gene interaction network and identifies the direct transcriptional targets of the perturbation using an ODE (Ordinary Differential Equation) based method.

Authors:Wei Xiao, Yin Jin, Darong Lai, Xinyi Yang, Yuanhua Liu, Christine Nardini

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NEWS

# Install 'NTW' in R:
install.packages('NTW', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • sos.data - SOS pathway perturbation data

On BioConductor:NTW-1.55.0(bioc 3.20)NTW-1.54.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

10 exports 1.45 score 1 dependencies 3 mentions

Last updated 2 months agofrom:0d80922f7d

Exports:A.estimation.SrowAP.estimation.Srowbackwardcomb.matrixforwardmethod.geomethod.mlmethod.sseNTWP.preestimation

Dependencies:mvtnorm

NTW vignette

Rendered fromNTW.Rnwusingutils::Sweaveon Jul 03 2024.

Last update: 2013-11-01
Started: 2013-11-01