Package: MiChip 1.59.0

Jonathon Blake

MiChip: MiChip Parsing and Summarizing Functions

This package takes the MiChip miRNA microarray .grp scanner output files and parses these out, providing summary and plotting functions to analyse MiChip hybridizations. A set of hybridizations is packaged into an ExpressionSet allowing it to be used by other BioConductor packages.

Authors:Jonathon Blake <[email protected]>

MiChip_1.59.0.tar.gz
MiChip_1.59.0.zip(r-4.5)MiChip_1.59.0.zip(r-4.4)MiChip_1.59.0.zip(r-4.3)
MiChip_1.59.0.tgz(r-4.4-any)MiChip_1.59.0.tgz(r-4.3-any)
MiChip_1.59.0.tar.gz(r-4.5-noble)MiChip_1.59.0.tar.gz(r-4.4-noble)
MiChip_1.59.0.tgz(r-4.4-emscripten)MiChip_1.59.0.tgz(r-4.3-emscripten)
MiChip.pdf |MiChip.html✨
MiChip/json (API)

Peer review:

On BioConductor:MiChip-1.59.0(bioc 3.20)MiChip-1.58.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

15 exports 0.71 score 2 dependencies

Last updated 2 months agofrom:6c54628b1d

Exports:boxplotDataboxplotDataNoFilecorrectForFlagsmyForgivingMediannormalizePerChipMedianoutputAnnotatedDataMatrixparseRawDataplotIntensitiesScatterremoveUnwantedRowsreturnAnnotatedDataMatrixsetIntensityCutoffstandardRemoveRowssummarizeIntensitiesAsMedianworkedExampleMedianNormalizeworkedExampleNotNormalizedData

Dependencies:BiobaseBiocGenerics