Package: MethTargetedNGS 1.39.0
Muhammad Ahmer Jamil
MethTargetedNGS: Perform Methylation Analysis on Next Generation Sequencing Data
Perform step by step methylation analysis of Next Generation Sequencing data.
Authors:
MethTargetedNGS_1.39.0.tar.gz
MethTargetedNGS_1.39.0.zip(r-4.5)MethTargetedNGS_1.39.0.zip(r-4.4)MethTargetedNGS_1.39.0.zip(r-4.3)
MethTargetedNGS_1.39.0.tgz(r-4.4-any)MethTargetedNGS_1.39.0.tgz(r-4.3-any)
MethTargetedNGS_1.39.0.tar.gz(r-4.5-noble)MethTargetedNGS_1.39.0.tar.gz(r-4.4-noble)
MethTargetedNGS_1.39.0.tgz(r-4.4-emscripten)MethTargetedNGS_1.39.0.tgz(r-4.3-emscripten)
MethTargetedNGS.pdf |MethTargetedNGS.html✨
MethTargetedNGS/json (API)
| # Install 'MethTargetedNGS' in R: |
| install.packages('MethTargetedNGS', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:MethTargetedNGS-1.39.0(bioc 3.21)MethTargetedNGS-1.38.0(bioc 3.20)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
researchfieldgeneticssequencingalignmentsequencematchingdataimport
Last updated 2 months agofrom:70f3c0ddd4. Checks:OK: 1 NOTE: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 29 2024 |
| R-4.5-win | NOTE | Nov 29 2024 |
| R-4.5-linux | NOTE | Nov 29 2024 |
| R-4.4-win | NOTE | Nov 29 2024 |
| R-4.4-mac | NOTE | Nov 29 2024 |
| R-4.3-win | NOTE | Nov 29 2024 |
| R-4.3-mac | NOTE | Nov 29 2024 |
Exports:bconvcompare_samplesfishertest_cpghmmbuildmethAlignmethAvgmethEntropymethHeatmapnhmmerodd_ratio
Dependencies:ade4askpassBiocGenericsBiostringsbitopscaToolsclicrayoncurlgenericsGenomeInfoDbGenomeInfoDbDatagluegplotsgtoolshttrIRangesjsonliteKernSmoothlatticelifecyclemagrittrMASSmimenlmeopensslpixmappwalignR6RcppRcppArmadillorlangS4VectorssegmentedseqinrspstringistringrsysUCSC.utilsvctrsXVectorzlibbioc
