Package: MethTargetedNGS 1.37.0

Muhammad Ahmer Jamil

MethTargetedNGS: Perform Methylation Analysis on Next Generation Sequencing Data

Perform step by step methylation analysis of Next Generation Sequencing data.

Authors:Muhammad Ahmer Jamil with Contribution of Prof. Holger Frohlich and Priv.-Doz. Dr. Osman El-Maarri

MethTargetedNGS_1.37.0.tar.gz
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MethTargetedNGS.pdf |MethTargetedNGS.html
MethTargetedNGS/json (API)

# Install 'MethTargetedNGS' in R:
install.packages('MethTargetedNGS', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:MethTargetedNGS-1.37.0(bioc 3.20)MethTargetedNGS-1.36.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

10 exports 1 stars 1.24 score 42 dependencies 1 mentions

Last updated 2 months agofrom:37e7483305

Exports:bconvcompare_samplesfishertest_cpghmmbuildmethAlignmethAvgmethEntropymethHeatmapnhmmerodd_ratio

Dependencies:ade4askpassBiocGenericsBiostringsbitopscaToolsclicrayoncurlGenomeInfoDbGenomeInfoDbDatagluegplotsgtoolshttrIRangesjsonliteKernSmoothlatticelifecyclemagrittrMASSmimenlmeopensslpixmappwalignR6RcppRcppArmadillorlangS4VectorssegmentedseqinrspstringistringrsysUCSC.utilsvctrsXVectorzlibbioc

Introduction to MethTargetedNGS

Rendered fromMethTargetedNGS.Rnwusingutils::Sweaveon Jul 01 2024.

Last update: 2015-04-03
Started: 2015-04-03