Package: MGFR 1.39.0

Khadija El Amrani
MGFR: Marker Gene Finder in RNA-seq data
The package is designed to detect marker genes from RNA-seq data.
Authors:
MGFR_1.39.0.tar.gz
MGFR_1.39.0.zip(r-4.7)MGFR_1.39.0.zip(r-4.6)MGFR_1.39.0.zip(r-4.5)
MGFR_1.39.0.tgz(r-4.6-any)MGFR_1.39.0.tgz(r-4.5-any)
MGFR_1.39.0.tar.gz(r-4.7-any)MGFR_1.39.0.tar.gz(r-4.6-any)
MGFR_1.39.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
MGFR/json (API)
NEWS
| # Install 'MGFR' in R: |
| install.packages('MGFR', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
- ref.mat - RNA-seq gene expression data set
On BioConductor:MGFR-1.39.0(bioc 3.24)MGFR-1.38.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
immunooncologygeneticsgeneexpressionrnaseq
Last updated from:234837449a. Checks:9 ERROR, 1 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 150 | ||
| linux-devel-x86_64 | ERROR | 321 | ||
| source / vignettes | ERROR | 218 | ||
| linux-release-x86_64 | ERROR | 401 | ||
| macos-release-arm64 | ERROR | 142 | ||
| macos-oldrel-arm64 | ERROR | 153 | ||
| windows-devel | ERROR | 174 | ||
| windows-release | ERROR | 159 | ||
| windows-oldrel | ERROR | 132 | ||
| wasm-release | OK | 115 |
Exports:getMarkerGenes.rnaseqgetMarkerGenes.rnaseq.html
Dependencies:annotateAnnotationDbiaskpassBiobaseBiocFileCacheBiocGenericsbiomaRtBiostringsbitbit64blobcachemclicpp11crayoncurlDBIdbplyrdplyrfastmapfilelockgenericsgluehmshttrhttr2IRangesjsonliteKEGGRESTlifecyclemagrittrmemoisemimeopensslpillarpkgconfigpngprettyunitsprogresspurrrR6rappdirsrlangRSQLiteS4VectorsSeqinfostringistringrsystibbletidyrtidyselectutf8vctrswithrXMLxml2xtableXVector
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Marker Gene Finder in RNA-seq data | MGFR-package MGFR |
| Marker Gene Detection | getMarkerGenes.rnaseq |
| Marker Gene Detection | getMarkerGenes.rnaseq.html |
| RNA-seq gene expression data set | ref.mat |