Package: MBQN 2.19.0

Eva Brombacher

MBQN: Mean/Median-balanced quantile normalization

Modified quantile normalization for omics or other matrix-like data distorted in location and scale.

Authors:Eva Brombacher [aut, cre], Clemens Kreutz [aut, ctb], Ariane Schad [aut, ctb]

MBQN_2.19.0.tar.gz
MBQN_2.19.0.zip(r-4.5)MBQN_2.19.0.zip(r-4.4)MBQN_2.19.0.zip(r-4.3)
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MBQN_2.19.0.tar.gz(r-4.5-noble)MBQN_2.19.0.tar.gz(r-4.4-noble)
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MBQN.pdf |MBQN.html
MBQN/json (API)
NEWS

# Install 'MBQN' in R:
install.packages('MBQN', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/arianeschad/mbqn/issues

On BioConductor:MBQN-2.19.0(bioc 3.21)MBQN-2.18.0(bioc 3.20)

normalizationpreprocessingproteomicssoftware

4.92 score 2 stars 14 scripts 234 downloads 14 exports 101 dependencies

Last updated 5 months agofrom:a95ce363bb. Checks:1 OK, 8 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 30 2025
R-4.5-winNOTEMar 30 2025
R-4.5-macNOTEMar 30 2025
R-4.5-linuxNOTEMar 30 2025
R-4.4-winNOTEMar 30 2025
R-4.4-macNOTEMar 30 2025
R-4.4-linuxNOTEMar 30 2025
R-4.3-winNOTEMar 30 2025
R-4.3-macNOTEMar 30 2025

Exports:getKminmaxgetPvaluembqnmbqnBoxplotmbqnGetIntersectmbqnGetNRIfeaturesmbqnGetThresholdmbqnNRImbqnPlotAllmbqnPlotRImbqnSimuDatambqnSimuDistortiononeSidedTesttruncateDecimals

Dependencies:abindaskpassbase64encBiobaseBiocFileCacheBiocGenericsbitbit64bitopsblobbslibcachemclassclicolorspacecpp11crayoncurlDBIdbplyrDelayedArraydigestdplyre1071evaluatefansifarverfastmapfilelockfontawesomefsgenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesggplot2gldgluegtablehighrhtmltoolshttrIRangesisobandjquerylibjsonliteknitrlabelinglatticelifecyclelimmalmommagrittrMASSMatrixMatrixGenericsmatrixStatsmemoisemgcvmimemunsellmvtnormnlmeopensslPairedDatapillarpkgconfigplogrpreprocessCoreproxypurrrR6rappdirsRColorBrewerRCurlrlangrmarkdownRSQLiteS4ArraysS4VectorssassscalesSparseArraystatmodstringistringrSummarizedExperimentsystibbletidyrtidyselecttinytexUCSC.utilsutf8vctrsviridisLitewithrxfunxml2XVectoryaml

MBQN vignette

Rendered fromMBQNpackage.Rmdusingknitr::rmarkdownon Mar 30 2025.

Last update: 2022-01-05
Started: 2018-02-01