Package: MAIT 1.39.0
MAIT: Statistical Analysis of Metabolomic Data
The MAIT package contains functions to perform end-to-end statistical analysis of LC/MS Metabolomic Data. Special emphasis is put on peak annotation and in modular function design of the functions.
Authors:
MAIT_1.39.0.tar.gz
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MAIT_1.39.0.tgz(r-4.4-any)MAIT_1.39.0.tgz(r-4.3-any)
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MAIT.pdf |MAIT.html✨
MAIT/json (API)
NEWS
# Install 'MAIT' in R: |
install.packages('MAIT', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
- Database - Human Metabolome Database
- MAIT - MAIT
- biotransformationsTable - BiotransformationsTable
- negAdducts - Negative adducts table
- posAdducts - Positive adducts table
On BioConductor:MAIT-1.39.0(bioc 3.20)MAIT-1.38.0(bioc 3.19)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 months agofrom:c0b4563ec1
Exports:BiotransformationsclassesclassifRatioClassesclassNumfeatureIDfeatureInfofeatureSigIDgetScoresTableidentifyMetabolitesloadingsLSDResultsMAITbuildermetaboliteTablemethodmodelmodelsovClassifRatioDataovClassifRatioTableparameterspcaLoadingspcaModelpcaScorespeakAggregationpeakAnnotationplotBoxplotplotHeatmapplotPCAplotPLSplsLoadingsplsModelplsScorespvaluespvaluesCorrectionrawDataresultsPathsampleProcessingscoressigPeaksTablespectralSigFeaturessummaryValidation
Dependencies:abindaffyaffyioagricolaeAlgDesignAnnotationFilteraskpassbackportsbase64encBHBiobaseBiocBaseUtilsBiocGenericsBiocManagerBiocParallelbitopsbootbslibcachemCAMERAcaretcaToolscheckmateclasscliclockclueclustercodetoolscolorspacecpp11crayoncrosstalkcurldata.tableDBIDelayedArraydiagramdigestdoParalleldotCall64dplyre1071ellipsisevaluatefansifarverfastmapfieldsfontawesomeforeachforeignformatRFormulafsfutile.loggerfutile.optionsfuturefuture.applygenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesggplot2globalsgluegowergplotsgraphgridExtragtablegtoolshardhathighrHmischmshtmlTablehtmltoolshtmlwidgetshttrigraphimputeipredIRangesisobanditeratorsjquerylibjsonliteKernSmoothknitrlabelinglambda.rlaterlatticelavalazyevallifecyclelimmalistenvlubridatemagrittrMALDIquantmapsMASSMassSpecWaveletMatrixMatrixGenericsmatrixStatsmemoiseMetaboCoreUtilsmgcvmimeModelMetricsMsCoreUtilsMsExperimentMsFeaturesMSnbaseMultiAssayExperimentmunsellmzIDmzRncdf4nlmennetnumDerivopensslparallellypcaMethodspillarpkgconfigplotlyplsplsgenomicsplyrpreprocessCoreprettyunitspROCprodlimprogressprogressrpromisesProtGenericsproxyPSMatchpurrrQFeaturesR6rappdirsRBGLRColorBrewerRcpprecipesreshape2Rhdf5libRhpcBLASctlrlangrmarkdownrpartrstudioapiS4ArraysS4VectorssassscalesshapesnowspamSparseArraySpectraSQUAREMstatmodstringistringrSummarizedExperimentsurvivalsystibbletidyrtidyselecttimechangetimeDatetinytextzdbUCSC.utilsutf8vctrsviridisviridisLitevsnwithrxcmsxfunXMLXVectoryamlzlibbioc