Package: M3C 1.27.0

Christopher John

M3C: Monte Carlo Reference-based Consensus Clustering

M3C is a consensus clustering algorithm that uses a Monte Carlo simulation to eliminate overestimation of K and can reject the null hypothesis K=1.

Authors:Christopher John, David Watson

M3C_1.27.0.tar.gz
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M3C.pdf |M3C.html
M3C/json (API)
NEWS

# Install 'M3C' in R:
install.packages('M3C', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • desx - GBM clinical annotation data
  • mydata - GBM expression data

On BioConductor:M3C-1.27.0(bioc 3.20)M3C-1.26.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

6 exports 1.00 score 52 dependencies 1 dependents 7 mentions

Last updated 2 months agofrom:8675ffcf25

Exports:clustersimfeaturefilterM3Cpcatsneumap

Dependencies:askpasscliclustercodetoolscolorspacecorpcordoParalleldoSNOWfansifarverforeachggplot2gluegtablehereisobanditeratorsjsonlitelabelinglatticelifecyclemagrittrMASSMatrixmatrixcalcmgcvmunsellnlmeopensslpillarpkgconfigpngR6rappdirsRColorBrewerRcppRcppEigenRcppTOMLreticulaterlangrprojrootRSpectraRtsnescalessnowsystibbleumaputf8vctrsviridisLitewithr

M3C: Monte Carlo Reference-based Consensus Clustering

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Last update: 2020-02-13
Started: 2017-07-05