Introduction | The leukemia data set from Golub et al. (1999) | Implemented functions | Comparison with the qvalue package
Package: LBE 1.81.0
Cyril Dalmasso
LBE: Estimation of the false discovery rate
LBE is an efficient procedure for estimating the proportion of true null hypotheses, the false discovery rate (and so the q-values) in the framework of estimating procedures based on the marginal distribution of the p-values without assumption for the alternative hypothesis.
Authors:
LBE_1.81.0.tar.gz
LBE_1.81.0.zip(r-4.7)LBE_1.81.0.zip(r-4.6)LBE_1.81.0.zip(r-4.5)
LBE_1.81.0.tgz(r-4.6-any)LBE_1.81.0.tgz(r-4.5-any)
LBE_1.81.0.tar.gz(r-4.7-any)LBE_1.81.0.tar.gz(r-4.6-any)
LBE_1.81.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
LBE/json (API)
| # Install 'LBE' in R: |
| install.packages('LBE', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- golub.pval - P-values corresponding to the gene expression data from Golub et al. (1999).
- hedenfalk.pval - P-values corresponding to the gene expression data from Hedenfalk et al. (2001).
On BioConductor:LBE-1.81.0(bioc 3.24)LBE-1.80.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:7155b880c8. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 134 | ||
| linux-devel-x86_64 | NOTE | 170 | ||
| source / vignettes | OK | 204 | ||
| linux-release-x86_64 | NOTE | 155 | ||
| macos-release-arm64 | NOTE | 84 | ||
| macos-oldrel-arm64 | NOTE | 68 | ||
| windows-devel | NOTE | 61 | ||
| windows-release | NOTE | 84 | ||
| windows-oldrel | NOTE | 66 | ||
| wasm-release | OK | 122 |
Exports:LBELBEaLBEplotLBEsummaryLBEwrite
Dependencies:
