Package: IsoCorrectoR 1.25.0
Christian Kohler
IsoCorrectoR: Correction for natural isotope abundance and tracer purity in MS and MS/MS data from stable isotope labeling experiments
IsoCorrectoR performs the correction of mass spectrometry data from stable isotope labeling/tracing metabolomics experiments with regard to natural isotope abundance and tracer impurity. Data from both MS and MS/MS measurements can be corrected (with any tracer isotope: 13C, 15N, 18O...), as well as ultra-high resolution MS data from multiple-tracer experiments (e.g. 13C and 15N used simultaneously). See the Bioconductor package IsoCorrectoRGUI for a graphical user interface to IsoCorrectoR. NOTE: With R version 4.0.0, writing correction results to Excel files may currently not work on Windows. However, writing results to csv works as before.
Authors:
IsoCorrectoR_1.25.0.tar.gz
IsoCorrectoR_1.25.0.zip(r-4.5)IsoCorrectoR_1.25.0.zip(r-4.4)IsoCorrectoR_1.25.0.zip(r-4.3)
IsoCorrectoR_1.25.0.tgz(r-4.4-any)IsoCorrectoR_1.25.0.tgz(r-4.3-any)
IsoCorrectoR_1.25.0.tar.gz(r-4.5-noble)IsoCorrectoR_1.25.0.tar.gz(r-4.4-noble)
IsoCorrectoR_1.25.0.tgz(r-4.4-emscripten)IsoCorrectoR_1.25.0.tgz(r-4.3-emscripten)
IsoCorrectoR.pdf |IsoCorrectoR.html✨
IsoCorrectoR/json (API)
NEWS
| # Install 'IsoCorrectoR' in R: |
| install.packages('IsoCorrectoR', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
- IsoCorrectoR - IsoCorrectoR example data
On BioConductor:IsoCorrectoR-1.25.0(bioc 3.21)IsoCorrectoR-1.24.0(bioc 3.20)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
softwaremetabolomicsmassspectrometrypreprocessingimmunooncology
Last updated 2 months agofrom:b3c775a21e. Checks:OK: 1 NOTE: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 29 2024 |
| R-4.5-win | NOTE | Nov 29 2024 |
| R-4.5-linux | NOTE | Nov 29 2024 |
| R-4.4-win | NOTE | Nov 29 2024 |
| R-4.4-mac | NOTE | Nov 29 2024 |
| R-4.3-win | NOTE | Nov 29 2024 |
| R-4.3-mac | NOTE | Nov 29 2024 |
Exports:IsoCorrection
Dependencies:bitbit64cellrangerclicliprcpp11crayondplyrfansigenericsgluehmslifecyclemagrittrpillarpkgconfigpracmaprettyunitsprogressquadprogR6readrreadxlrematchrlangstringistringrtibbletidyselecttzdbutf8vctrsvroomwithrWriteXLS
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Algorithm For Natural Isotope Abundance And Tracer Purity Correction Of Data From Stable Isotope Labeling Experiments | IsoCorrection |
| IsoCorrectoR example data | IsoCorrectoR |
