Package: IsoCorrectoR 1.31.0

Christian Kohler

IsoCorrectoR: Correction for natural isotope abundance and tracer purity in MS and MS/MS data from stable isotope labeling experiments

IsoCorrectoR performs the correction of mass spectrometry data from stable isotope labeling/tracing metabolomics experiments with regard to natural isotope abundance and tracer impurity. Data from both MS and MS/MS measurements can be corrected (with any tracer isotope: 13C, 15N, 18O...), as well as ultra-high resolution MS data from multiple-tracer experiments (e.g. 13C and 15N used simultaneously). See the Bioconductor package IsoCorrectoRGUI for a graphical user interface to IsoCorrectoR. NOTE: With R version 4.0.0, writing correction results to Excel files may currently not work on Windows. However, writing results to csv works as before.

Authors:Christian Kohler [cre, aut], Paul Heinrich [aut]

IsoCorrectoR_1.31.0.tar.gz
IsoCorrectoR_1.31.0.zip(r-4.7)IsoCorrectoR_1.31.0.zip(r-4.6)IsoCorrectoR_1.31.0.zip(r-4.5)
IsoCorrectoR_1.31.0.tgz(r-4.6-any)IsoCorrectoR_1.31.0.tgz(r-4.5-any)
IsoCorrectoR_1.31.0.tar.gz(r-4.7-any)IsoCorrectoR_1.31.0.tar.gz(r-4.6-any)
IsoCorrectoR_1.31.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
IsoCorrectoR/json (API)
NEWS

# Install 'IsoCorrectoR' in R:
install.packages('IsoCorrectoR', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On BioConductor:IsoCorrectoR-1.31.0(bioc 3.24)IsoCorrectoR-1.30.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

softwaremetabolomicsmassspectrometrypreprocessingimmunooncology

4.56 score 1 packages 7 scripts 419 downloads 6 mentions 1 exports 34 dependencies

Last updated from:603255fdf6. Checks:1 WARNING, 7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksWARNING160
linux-devel-x86_64NOTE227
source / vignettesOK193
linux-release-x86_64NOTE218
macos-release-arm64NOTE114
macos-oldrel-arm64NOTE110
windows-develNOTE136
windows-releaseNOTE130
windows-oldrelNOTE120
wasm-releaseOK116

Exports:IsoCorrection

Dependencies:bitbit64cellrangerclicliprcpp11crayondplyrgenericsgluehmslifecyclemagrittrpillarpkgconfigpracmaprettyunitsprogressquadprogR6readrreadxlrematchrlangstringistringrtibbletidyselecttzdbutf8vctrsvroomwithrWriteXLS

Introduction to IsoCorrectoR

Paul Heinrich

Rendered fromIsoCorrectoR.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2019-05-20
Started: 2018-07-12