Package: HubPub 1.21.1

Kayla Interdonato

HubPub: Utilities to create and use Bioconductor Hubs

HubPub provides users with functionality to help with the Bioconductor Hub structures. The package provides the ability to create a skeleton of a Hub style package that the user can then populate with the necessary information. There are also functions to help add resources to the Hub package metadata files as well as publish data to the Bioconductor S3 bucket.

Authors:Kayla Interdonato [aut, cre], Martin Morgan [aut], Lori Shepherd [ctb]

HubPub_1.21.1.tar.gz
HubPub_1.21.1.zip(r-4.7)HubPub_1.21.1.zip(r-4.6)HubPub_1.21.1.zip(r-4.5)
HubPub_1.21.1.tgz(r-4.6-any)HubPub_1.21.1.tgz(r-4.5-any)
HubPub_1.21.1.tar.gz(r-4.7-any)HubPub_1.21.1.tar.gz(r-4.6-any)
HubPub_1.21.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
HubPub/json (API)
NEWS

# Install 'HubPub' in R:
install.packages('HubPub', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bioconductor/hubpub/issues

On BioConductor:HubPub-1.21.0(bioc 3.24)HubPub-1.20.0(bioc 3.23)

dataimportinfrastructuresoftwarethirdpartyclientbioconductor-package

5.03 score 3 stars 6 scripts 498 downloads 4 exports 68 dependencies

Last updated from:9d1fe289b1. Checks:1 WARNING, 5 NOTE, 2 OK, 2 ERROR. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksWARNING185
linux-devel-x86_64NOTE276
source / vignettesOK298
linux-release-x86_64NOTE258
macos-release-arm64NOTE120
macos-oldrel-arm64ERROR153
windows-develNOTE212
windows-releaseNOTE162
windows-oldrelERROR126
wasm-releaseOK156

Exports:add_resourcecreate_pkghub_metadatapublish_resource

Dependencies:askpassavailableaws.s3aws.signaturebase64encBiocManagerbiocthiscachemclicliprclisymbolscrayoncredentialscurldescdigestdplyrfastmapfsgenericsgertghgitcredsgluehttrhttr2inijaneaustenrjsonlitelatticelifecyclemagrittrMatrixmemoisemimeopensslpillarpkgconfigpurrrR.cacheR.methodsS3R.ooR.utilsR6rappdirsRcpprlangrprojrootrstudioapiSnowballCstringdiststringistringrstylersystibbletidyselecttidytexttokenizersusethisutf8vctrswhiskerwithrxml2yamlyesnozip

Creating A Hub Package: ExperimentHub or AnnotationHub

Valerie Obenchain, Lori Shepherd, and Kayla Interdonato

Rendered fromCreateAHubPackage.Rmdusingknitr::rmarkdownon May 20 2026.

Last update: 2026-05-20
Started: 2021-07-06

HubPub: Help with publication of Hub packages

Kayla Interdonato, Martin Morgan

Rendered fromHubPub.Rmdusingknitr::rmarkdownon May 20 2026.

Last update: 2021-07-06
Started: 2021-03-22