Package: HubPub 1.15.4

Kayla Interdonato

HubPub: Utilities to create and use Bioconductor Hubs

HubPub provides users with functionality to help with the Bioconductor Hub structures. The package provides the ability to create a skeleton of a Hub style package that the user can then populate with the necessary information. There are also functions to help add resources to the Hub package metadata files as well as publish data to the Bioconductor S3 bucket.

Authors:Kayla Interdonato [aut, cre], Martin Morgan [aut], Lori Shepherd [ctb]

HubPub_1.15.4.tar.gz
HubPub_1.15.4.zip(r-4.5)HubPub_1.15.4.zip(r-4.4)HubPub_1.15.4.zip(r-4.3)
HubPub_1.15.4.tgz(r-4.5-any)HubPub_1.15.4.tgz(r-4.4-any)HubPub_1.15.4.tgz(r-4.3-any)
HubPub_1.15.4.tar.gz(r-4.5-noble)HubPub_1.15.4.tar.gz(r-4.4-noble)
HubPub_1.15.4.tgz(r-4.4-emscripten)HubPub_1.15.4.tgz(r-4.3-emscripten)
HubPub.pdf |HubPub.html
HubPub/json (API)
NEWS

# Install 'HubPub' in R:
install.packages('HubPub', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bioconductor/hubpub/issues

On BioConductor:HubPub-1.15.3(bioc 3.21)HubPub-1.14.0(bioc 3.20)

dataimportinfrastructuresoftwarethirdpartyclientbioconductor-package

5.18 score 3 stars 4 scripts 268 downloads 4 exports 69 dependencies

Last updated 14 days agofrom:c0787a1cfe. Checks:1 OK, 8 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 15 2025
R-4.5-winNOTEMar 15 2025
R-4.5-macNOTEMar 15 2025
R-4.5-linuxNOTEMar 15 2025
R-4.4-winNOTEMar 15 2025
R-4.4-macNOTEMar 15 2025
R-4.4-linuxNOTEMar 15 2025
R-4.3-winNOTEMar 15 2025
R-4.3-macNOTEMar 15 2025

Exports:add_resourcecreate_pkghub_metadatapublish_resource

Dependencies:askpassavailableaws.s3aws.signaturebase64encBiocManagerbiocthiscachemclicliprclisymbolscrayoncredentialscurldescdigestdplyrfansifastmapfsgenericsgertghgitcredsgluehttrhttr2inijaneaustenrjsonlitelatticelifecyclemagrittrMatrixmemoisemimeopensslpillarpkgconfigpurrrR.cacheR.methodsS3R.ooR.utilsR6rappdirsRcpprlangrprojrootrstudioapiSnowballCstringdiststringistringrstylersystibbletidyselecttidytexttokenizersusethisutf8vctrswhiskerwithrxml2yamlyesnozip

Creating A Hub Package: ExperimentHub or AnnotationHub

Rendered fromCreateAHubPackage.Rmdusingknitr::rmarkdownon Mar 15 2025.

Last update: 2025-03-14
Started: 2021-07-06

HubPub: Help with publication of Hub packages

Rendered fromHubPub.Rmdusingknitr::rmarkdownon Mar 15 2025.

Last update: 2021-07-06
Started: 2021-03-22