Package: HubPub 1.15.0

Kayla Interdonato

HubPub: Utilities to create and use Bioconductor Hubs

HubPub provides users with functionality to help with the Bioconductor Hub structures. The package provides the ability to create a skeleton of a Hub style package that the user can then populate with the necessary information. There are also functions to help add resources to the Hub package metadata files as well as publish data to the Bioconductor S3 bucket.

Authors:Kayla Interdonato [aut, cre], Martin Morgan [aut]

HubPub_1.15.0.tar.gz
HubPub_1.15.0.zip(r-4.5)HubPub_1.15.0.zip(r-4.4)HubPub_1.15.0.zip(r-4.3)
HubPub_1.15.0.tgz(r-4.4-any)HubPub_1.15.0.tgz(r-4.3-any)
HubPub_1.15.0.tar.gz(r-4.5-noble)HubPub_1.15.0.tar.gz(r-4.4-noble)
HubPub_1.15.0.tgz(r-4.4-emscripten)HubPub_1.15.0.tgz(r-4.3-emscripten)
HubPub.pdf |HubPub.html✨
HubPub/json (API)
NEWS

# Install 'HubPub' in R:
install.packages('HubPub', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/bioconductor/hubpub/issues

On BioConductor:HubPub-1.13.0(bioc 3.20)HubPub-1.12.0(bioc 3.19)

dataimportinfrastructuresoftwarethirdpartyclientbioconductor-package

4.95 score 3 stars 4 scripts 236 downloads 4 exports 69 dependencies

Last updated 23 days agofrom:df312cabd4. Checks:OK: 1 NOTE: 4 ERROR: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 30 2024
R-4.5-winNOTEOct 30 2024
R-4.5-linuxNOTEOct 30 2024
R-4.4-winNOTEOct 30 2024
R-4.4-macERROROct 30 2024
R-4.3-winNOTEOct 30 2024
R-4.3-macERROROct 30 2024

Exports:add_resourcecreate_pkghub_metadatapublish_resource

Dependencies:askpassavailableaws.s3aws.signaturebase64encBiocManagerbiocthiscachemclicliprclisymbolscrayoncredentialscurldescdigestdplyrfansifastmapfsgenericsgertghgitcredsgluehttrhttr2inijaneaustenrjsonlitelatticelifecyclemagrittrMatrixmemoisemimeopensslpillarpkgconfigpurrrR.cacheR.methodsS3R.ooR.utilsR6rappdirsRcpprlangrprojrootrstudioapiSnowballCstringdiststringistringrstylersystibbletidyselecttidytexttokenizersusethisutf8vctrswhiskerwithrxml2yamlyesnozip

Creating A Hub Package: ExperimentHub or AnnotationHub

Valerie Obenchain, Lori Shepherd, and Kayla Interdonato

Rendered fromCreateAHubPackage.Rmdusingknitr::rmarkdownon Oct 30 2024.

Last update: 2023-02-09
Started: 2021-07-06

HubPub: Help with publication of Hub packages

Kayla Interdonato, Martin Morgan

Rendered fromHubPub.Rmdusingknitr::rmarkdownon Oct 30 2024.

Last update: 2021-07-06
Started: 2021-03-22