Package: HubPub 1.15.3

Kayla Interdonato

HubPub: Utilities to create and use Bioconductor Hubs

HubPub provides users with functionality to help with the Bioconductor Hub structures. The package provides the ability to create a skeleton of a Hub style package that the user can then populate with the necessary information. There are also functions to help add resources to the Hub package metadata files as well as publish data to the Bioconductor S3 bucket.

Authors:Kayla Interdonato [aut, cre], Martin Morgan [aut], Lori Shepherd [ctb]

HubPub_1.15.3.tar.gz
HubPub_1.15.3.zip(r-4.5)HubPub_1.15.3.zip(r-4.4)HubPub_1.15.3.zip(r-4.3)
HubPub_1.15.3.tgz(r-4.4-any)HubPub_1.15.3.tgz(r-4.3-any)
HubPub_1.15.3.tar.gz(r-4.5-noble)HubPub_1.15.3.tar.gz(r-4.4-noble)
HubPub_1.15.3.tgz(r-4.4-emscripten)HubPub_1.15.3.tgz(r-4.3-emscripten)
HubPub.pdf |HubPub.html✨
HubPub/json (API)
NEWS

# Install 'HubPub' in R:
install.packages('HubPub', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/bioconductor/hubpub/issues

On BioConductor:HubPub-1.15.2(bioc 3.21)HubPub-1.14.0(bioc 3.20)

dataimportinfrastructuresoftwarethirdpartyclientbioconductor-package

5.18 score 3 stars 4 scripts 267 downloads 4 exports 69 dependencies

Last updated 15 hours agofrom:8a15fe1cf4. Checks:1 OK, 6 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 22 2025
R-4.5-winNOTEJan 22 2025
R-4.5-linuxNOTEJan 22 2025
R-4.4-winNOTEJan 22 2025
R-4.4-macNOTEJan 22 2025
R-4.3-winNOTEJan 22 2025
R-4.3-macNOTEJan 22 2025

Exports:add_resourcecreate_pkghub_metadatapublish_resource

Dependencies:askpassavailableaws.s3aws.signaturebase64encBiocManagerbiocthiscachemclicliprclisymbolscrayoncredentialscurldescdigestdplyrfansifastmapfsgenericsgertghgitcredsgluehttrhttr2inijaneaustenrjsonlitelatticelifecyclemagrittrMatrixmemoisemimeopensslpillarpkgconfigpurrrR.cacheR.methodsS3R.ooR.utilsR6rappdirsRcpprlangrprojrootrstudioapiSnowballCstringdiststringistringrstylersystibbletidyselecttidytexttokenizersusethisutf8vctrswhiskerwithrxml2yamlyesnozip

Creating A Hub Package: ExperimentHub or AnnotationHub

Valerie Obenchain, Lori Shepherd, and Kayla Interdonato

Rendered fromCreateAHubPackage.Rmdusingknitr::rmarkdownon Jan 22 2025.

Last update: 2025-01-21
Started: 2021-07-06

HubPub: Help with publication of Hub packages

Kayla Interdonato, Martin Morgan

Rendered fromHubPub.Rmdusingknitr::rmarkdownon Jan 22 2025.

Last update: 2021-07-06
Started: 2021-03-22