Package: HilbertCurve 2.1.0

Zuguang Gu

HilbertCurve: Making 2D Hilbert Curve

Hilbert curve is a type of space-filling curves that fold one dimensional axis into a two dimensional space, but with still preserves the locality. This package aims to provide an easy and flexible way to visualize data through Hilbert curve.

Authors:Zuguang Gu [aut, cre]

HilbertCurve_2.1.0.tar.gz
HilbertCurve_2.1.0.zip(r-4.5)HilbertCurve_2.1.0.zip(r-4.4)HilbertCurve_2.1.0.zip(r-4.3)
HilbertCurve_2.1.0.tgz(r-4.4-x86_64)HilbertCurve_2.1.0.tgz(r-4.4-arm64)HilbertCurve_2.1.0.tgz(r-4.3-x86_64)HilbertCurve_2.1.0.tgz(r-4.3-arm64)
HilbertCurve_2.1.0.tar.gz(r-4.5-noble)HilbertCurve_2.1.0.tar.gz(r-4.4-noble)
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HilbertCurve.pdf |HilbertCurve.html✨
HilbertCurve/json (API)
NEWS

# Install 'HilbertCurve' in R:
install.packages('HilbertCurve', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/jokergoo/hilbertcurve/issues

Pkgdown:https://jokergoo.github.io

Uses libs:
  • c++– GNU Standard C++ Library v3

On BioConductor:HilbertCurve-2.1.0(bioc 3.21)HilbertCurve-2.0.0(bioc 3.20)

softwarevisualizationsequencingcoveragegenomeannotationcpp

7.44 score 41 stars 48 scripts 257 downloads 1 mentions 20 exports 25 dependencies

Last updated 2 months agofrom:32b4f09d73. Checks:OK: 9. Indexed: yes.

TargetResultDate
Doc / VignettesOKDec 18 2024
R-4.5-win-x86_64OKDec 18 2024
R-4.5-linux-x86_64OKDec 18 2024
R-4.4-win-x86_64OKDec 18 2024
R-4.4-mac-x86_64OKDec 18 2024
R-4.4-mac-aarch64OKDec 18 2024
R-4.3-win-x86_64OKDec 18 2024
R-4.3-mac-x86_64OKDec 18 2024
R-4.3-mac-aarch64OKDec 18 2024

Exports:default_overlayGenomicHilbertCurvehc_centered_texthc_layerhc_levelhc_maphc_normal_pointshc_offsethc_pnghc_pointshc_polygonhc_recthc_segmented_pointshc_segmentshc_texthc_whichHilbertCurveis_whiteunzoomzoom

Dependencies:askpassBiocGenericscirclizecolorspacecurlgenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesGlobalOptionshttrIRangesjsonlitemimeopensslpngpolylabelrR6RcppS4VectorsshapesysUCSC.utilsXVectorzlibbioc

The HilbertCurve package

Zuguang Gu ([email protected])

Rendered fromHilbertCurve.Rmdusingknitr::rmarkdownon Dec 18 2024.

Last update: 2024-09-10
Started: 2015-07-24

Readme and manuals

Help Manual

Help pageTopics
Default color overlay for adding new layersdefault_overlay
Initialize a Hilbert curve specifically for genomic dataGenomicHilbertCurve
The GenomicHilbertCurve classGenomicHilbertCurve-class
Add text to the center of the blockhc_centered_text hc_centered_text,HilbertCurve-method
Method dispatch page for hc_layerhc_layer
Add a new layer to the Hilbert curvehc_layer,GenomicHilbertCurve-method
Add a new layer to the Hilbert curvehc_layer,HilbertCurve-method
Level of the Hilbert curvehc_level hc_level,HilbertCurve-method
Draw a map which represents positions of different chromosomes on the curvehc_map hc_map,GenomicHilbertCurve-method
Add points to the Hilbert curvehc_normal_points hc_normal_points,HilbertCurve-method
Adjust positionshc_offset hc_offset,HilbertCurve-method
Save Hilbert curve as a PNG figurehc_png hc_png,HilbertCurve-method
Method dispatch page for hc_pointshc_points
Add points to the Hilbert curvehc_points,GenomicHilbertCurve-method
Add points to the Hilbert curvehc_points,HilbertCurve-method
Method dispatch page for hc_polygonhc_polygon
Add text to Hilbert curvehc_polygon,GenomicHilbertCurve-method
Add polygons to Hilbert curvehc_polygon,HilbertCurve-method
Method dispatch page for hc_recthc_rect
Add rectangles on Hilbert curvehc_rect,GenomicHilbertCurve-method
Add rectangles on Hilbert curvehc_rect,HilbertCurve-method
Add points to the Hilbert curvehc_segmented_points hc_segmented_points,HilbertCurve-method
Method dispatch page for hc_segmentshc_segments
Add line segments to Hilbert curvehc_segments,GenomicHilbertCurve-method
Add line segments to Hilbert curvehc_segments,HilbertCurve-method
Method dispatch page for hc_texthc_text
Add text to Hilbert curvehc_text,GenomicHilbertCurve-method
Add text to Hilbert curvehc_text,HilbertCurve-method
Method dispatch page for hc_whichhc_which
Query regionshc_which,GenomicHilbertCurve-method
Query regionshc_which,HilbertCurve-method
Initialize a Hilbert curveHilbertCurve
The HilbertCurve classHilbertCurve-class
Whether the color is whiteis_white
Print the HilbertCurve objectshow show,HilbertCurve-method
Transform zoomed positions to their original valuesunzoom unzoom,HilbertCurve-method
Zoom original positionszoom zoom,HilbertCurve-method