Installation | Install Conda packages with install_CondaTools. | Install R package dependencies with install_CondaSysReqs. | Acknowledgements | Session Information
Package: Herper 1.23.0
Thomas Carroll
Herper: The Herper package is a simple toolset to install and manage conda packages and environments from R
Many tools for data analysis are not available in R, but are present in public repositories like conda. The Herper package provides a comprehensive set of functions to interact with the conda package managament system. With Herper users can install, manage and run conda packages from the comfort of their R session. Herper also provides an ad-hoc approach to handling external system requirements for R packages. For people developing packages with python conda dependencies we recommend using basilisk (https://bioconductor.org/packages/release/bioc/html/basilisk.html) to internally support these system requirments pre-hoc.
Authors:
Herper_1.23.0.tar.gz
Herper_1.23.0.zip(r-4.7)Herper_1.23.0.zip(r-4.6)Herper_1.23.0.zip(r-4.5)
Herper_1.23.0.tgz(r-4.6-any)Herper_1.23.0.tgz(r-4.5-any)
Herper_1.23.0.tar.gz(r-4.7-any)Herper_1.23.0.tar.gz(r-4.6-any)
Herper_1.23.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
Herper/json (API)
| # Install 'Herper' in R: |
| install.packages('Herper', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/rockefelleruniversity/herper/issues
On BioConductor:Herper-1.23.0(bioc 3.24)Herper-1.22.0(bioc 3.23)
Last updated from:6c073ad291. Checks:8 ERROR, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 151 | ||
| linux-devel-x86_64 | ERROR | 208 | ||
| source / vignettes | OK | 188 | ||
| linux-release-x86_64 | ERROR | 163 | ||
| macos-release-arm64 | ERROR | 95 | ||
| macos-oldrel-arm64 | ERROR | 80 | ||
| windows-devel | ERROR | 90 | ||
| windows-release | ERROR | 85 | ||
| windows-oldrel | ERROR | 113 | ||
| wasm-release | OK | 124 |
Exports:conda_searchexport_CondaEnvimport_CondaEnvinstall_CondaSysReqsinstall_CondaToolslist_CondaEnvlist_CondaPkgslocal_CondaEnvwith_CondaEnv
Dependencies:herejsonlitelatticeMatrixpngrappdirsRcppRcppTOMLreticulaterjsonrlangrprojrootwithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Search package availability | conda_search |
| Export Conda environment. | export_CondaEnv import_CondaEnv |
| Install Conda requirements listed in the System Requirement field of description | install_CondaSysReqs |
| Install Conda requirements. | install_CondaTools |
| List Conda environments. | list_CondaEnv |
| List Conda packages. | list_CondaPkgs |
| Use Conda environments. | local_CondaEnv with_CondaEnv |
