Package: Heatplus 3.21.0

Alexander Ploner

Heatplus: Heatmaps with row and/or column covariates and colored clusters

Display a rectangular heatmap (intensity plot) of a data matrix. By default, both samples (columns) and features (row) of the matrix are sorted according to a hierarchical clustering, and the corresponding dendrogram is plotted. Optionally, panels with additional information about samples and features can be added to the plot.

Authors:Alexander Ploner <[email protected]>

Heatplus_3.21.0.tar.gz
Heatplus_3.21.0.zip(r-4.7)Heatplus_3.21.0.zip(r-4.6)Heatplus_3.21.0.zip(r-4.5)
Heatplus_3.21.0.tgz(r-4.6-any)Heatplus_3.21.0.tgz(r-4.5-any)
Heatplus_3.21.0.tar.gz(r-4.7-any)Heatplus_3.21.0.tar.gz(r-4.6-any)
Heatplus_3.21.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
Heatplus/json (API)

# Install 'Heatplus' in R:
install.packages('Heatplus', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/alexploner/heatplus/issues

On BioConductor:Heatplus-3.21.0(bioc 3.24)Heatplus-3.20.0(bioc 3.23)

microarrayvisualization

8.11 score 2 stars 6 packages 119 scripts 77 mentions 25 exports 1 dependencies

Last updated from:165bf9dc5c. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR171
linux-devel-x86_64NOTE204
source / vignettesOK209
linux-release-x86_64NOTE177
macos-release-arm64NOTE117
macos-oldrel-arm64NOTE103
windows-develNOTE486
windows-releaseNOTE517
windows-oldrelNOTE459
wasm-releaseOK128

Exports:annHeatmapannHeatmap.defaultannHeatmap.ExpressionSetannHeatmap2breakColorsBrewerClusterColconvAnnDatadoLegendextractArgg2r.colorsheatmap_2heatmap_plusheatmapLayoutmodifyExistingListniceBreaksoldCutplot.dendrogramoldPicketplotpicketPlotpicketPlotControlplot.annHeatmapprint.annHeatmapRainbowPastelregHeatmapregHeatmap.defaultRGBColVec

Dependencies:RColorBrewer

Old functions (deprecated)
Rendered fromoldHeatplus.Rnwusingutils::Sweave

Last update: 2021-03-01
Started: 2013-11-01

Commented package source
Rendered fromannHeatmapCommentedSource.Rnwusingutils::Sweave

Last update: 2021-01-11
Started: 2013-11-01

Annotated and regular heatmaps
Rendered fromannHeatmap.Rnwusingutils::Sweave

Last update: 2017-08-30
Started: 2013-11-01