Package: Heatplus 3.15.0

Alexander Ploner

Heatplus: Heatmaps with row and/or column covariates and colored clusters

Display a rectangular heatmap (intensity plot) of a data matrix. By default, both samples (columns) and features (row) of the matrix are sorted according to a hierarchical clustering, and the corresponding dendrogram is plotted. Optionally, panels with additional information about samples and features can be added to the plot.

Authors:Alexander Ploner <[email protected]>

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Heatplus.pdf |Heatplus.html
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NEWS

# Install 'Heatplus' in R:
install.packages('Heatplus', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/alexploner/heatplus/issues

On BioConductor:Heatplus-3.15.0(bioc 3.21)Heatplus-3.14.0(bioc 3.20)

microarrayvisualization

7.64 score 5 packages 96 scripts 901 downloads 77 mentions 25 exports 1 dependencies

Last updated 2 months agofrom:dc4ccf1a86. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 29 2024
R-4.5-winNOTENov 29 2024
R-4.5-linuxNOTENov 29 2024
R-4.4-winNOTENov 29 2024
R-4.4-macNOTENov 29 2024
R-4.3-winNOTENov 29 2024
R-4.3-macNOTENov 29 2024

Exports:annHeatmapannHeatmap.defaultannHeatmap.ExpressionSetannHeatmap2breakColorsBrewerClusterColconvAnnDatadoLegendextractArgg2r.colorsheatmap_2heatmap_plusheatmapLayoutmodifyExistingListniceBreaksoldCutplot.dendrogramoldPicketplotpicketPlotpicketPlotControlplot.annHeatmapprint.annHeatmapRainbowPastelregHeatmapregHeatmap.defaultRGBColVec

Dependencies:RColorBrewer

Annotated and regular heatmaps

Rendered fromannHeatmap.Rnwusingutils::Sweaveon Nov 29 2024.

Last update: 2017-08-30
Started: 2013-11-01

Commented package source

Rendered fromannHeatmapCommentedSource.Rnwusingutils::Sweaveon Nov 29 2024.

Last update: 2021-01-11
Started: 2013-11-01

Old functions (deprecated)

Rendered fromoldHeatplus.Rnwusingutils::Sweaveon Nov 29 2024.

Last update: 2021-03-01
Started: 2013-11-01