Package: GraphPAC 1.49.0

Gregory Ryslik

GraphPAC: Identification of Mutational Clusters in Proteins via a Graph Theoretical Approach.

Identifies mutational clusters of amino acids in a protein while utilizing the proteins tertiary structure via a graph theoretical model.

Authors:Gregory Ryslik, Hongyu Zhao

GraphPAC_1.49.0.tar.gz
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GraphPAC.pdf |GraphPAC.html✨
GraphPAC/json (API)
NEWS

# Install 'GraphPAC' in R:
install.packages('GraphPAC', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:GraphPAC-1.49.0(bioc 3.21)GraphPAC-1.48.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

clusteringproteomics

4.48 score 1 packages 1 scripts 274 downloads 5 mentions 3 exports 44 dependencies

Last updated 4 months agofrom:fbd6916f9a. Checks:1 OK, 6 NOTE, 1 WARNING. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 28 2025
R-4.5-winNOTEJan 28 2025
R-4.5-macWARNINGJan 28 2025
R-4.5-linuxNOTEJan 28 2025
R-4.4-winNOTEJan 28 2025
R-4.4-macNOTEJan 28 2025
R-4.3-winNOTEJan 28 2025
R-4.3-macNOTEJan 28 2025

Exports:Find.TSP.PathGraphClustPlot.Protein

Dependencies:askpassBiobaseBiocGenericsBiostringsclicodetoolscombinatcpp11crayoncurlforeachgdatagenericsGenomeInfoDbGenomeInfoDbDatagluegtoolshttrigraphiPACIRangesiteratorsjsonlitelatticelifecyclemagrittrMASSMatrixmimemulttestopensslpkgconfigpwalignR6rlangRMallowS4Vectorsscatterplot3dsurvivalsysTSPUCSC.utilsvctrsXVector

iPAC: identification of Protein Amino acid Mutations

Rendered fromGraphPAC.Rnwusingutils::Sweaveon Jan 28 2025.

Last update: 2018-08-20
Started: 2012-12-15