Package: GMRP 1.41.0

Yuan-De Tan

GMRP: GWAS-based Mendelian Randomization and Path Analyses

Perform Mendelian randomization analysis of multiple SNPs to determine risk factors causing disease of study and to exclude confounding variabels and perform path analysis to construct path of risk factors to the disease.

Authors:Yuan-De Tan

GMRP_1.41.0.tar.gz
GMRP_1.41.0.zip(r-4.7)GMRP_1.41.0.zip(r-4.6)GMRP_1.41.0.zip(r-4.5)
GMRP_1.41.0.tgz(r-4.6-any)GMRP_1.41.0.tgz(r-4.5-any)
GMRP_1.41.0.tar.gz(r-4.7-any)GMRP_1.41.0.tar.gz(r-4.6-any)
GMRP_1.41.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
GMRP/json (API)

# Install 'GMRP' in R:
install.packages('GMRP', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • beta.data - Beta Data Of SNP Regressed on Causal Variables and Disease
  • cad.data - BoldGWAS Meta-analyzed Data of Coronary Artery Disease
  • lpd.data - *GWAS* Meta-analyzed Data of Lipoprotein Cholesterols
  • SNP358.data - Data of 358 SNPs
  • SNP368annot.data - Annotation data of 368SNPs

On BioConductor:GMRP-1.41.0(bioc 3.24)GMRP-1.40.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

sequencingregressionsnp

4.00 score 8 scripts 360 downloads 8 exports 9 dependencies

Last updated from:a31ee7640e. Checks:1 ERROR, 4 NOTE, 2 OK, 3 WARNING. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR149
linux-devel-x86_64NOTE179
source / vignettesOK261
linux-release-x86_64NOTE201
macos-release-arm64NOTE95
macos-oldrel-arm64NOTE106
windows-develWARNING106
windows-releaseWARNING102
windows-oldrelWARNING116
wasm-releaseOK102

Exports:chrpfmergemktablepathpathdiagrampathdiagram2snpPositAnnotucscannot

Dependencies:BiocGenericsdiagramgenericsGenomicRangesIRangesplotrixS4VectorsSeqinfoshape

Causal Effect Analysis of Risk Factors for Disease with the "GMRP" package

Rendered fromGMRP.Rnwusingutils::Sweaveon May 30 2026.

Last update: 2018-05-12
Started: 2016-03-23