Package: GA4GHshiny 1.29.0
GA4GHshiny: Shiny application for interacting with GA4GH-based data servers
GA4GHshiny package provides an easy way to interact with data servers based on Global Alliance for Genomics and Health (GA4GH) genomics API through a Shiny application. It also integrates with Beacon Network.
Authors:
GA4GHshiny_1.29.0.tar.gz
GA4GHshiny_1.29.0.zip(r-4.5)GA4GHshiny_1.29.0.zip(r-4.4)GA4GHshiny_1.29.0.zip(r-4.3)
GA4GHshiny_1.29.0.tgz(r-4.4-any)GA4GHshiny_1.29.0.tgz(r-4.3-any)
GA4GHshiny_1.29.0.tar.gz(r-4.5-noble)GA4GHshiny_1.29.0.tar.gz(r-4.4-noble)
GA4GHshiny_1.29.0.tgz(r-4.4-emscripten)GA4GHshiny_1.29.0.tgz(r-4.3-emscripten)
GA4GHshiny.pdf |GA4GHshiny.html✨
GA4GHshiny/json (API)
# Install 'GA4GHshiny' in R: |
install.packages('GA4GHshiny', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/labbcb/ga4ghshiny/issues
On BioConductor:GA4GHshiny-1.29.0(bioc 3.21)GA4GHshiny-1.28.0(bioc 3.20)
Last updated 2 months agofrom:145a45dbe6. Checks:OK: 1 ERROR: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Dec 18 2024 |
R-4.5-win | ERROR | Dec 18 2024 |
R-4.5-linux | ERROR | Dec 18 2024 |
R-4.4-win | ERROR | Dec 18 2024 |
R-4.4-mac | ERROR | Dec 18 2024 |
R-4.3-win | ERROR | Dec 18 2024 |
R-4.3-mac | ERROR | Dec 18 2024 |
Exports:appcountGenotype
Dependencies:abindAnnotationDbiaskpassbase64encBHBiobaseBiocGenericsBiocIOBiocParallelBiostringsbitbit64bitopsblobBSgenomebslibcachemclicodetoolscommonmarkcpp11crayoncrosstalkcurlDBIDelayedArraydigestdplyrDTevaluatefansifastmapfontawesomeformatRfsfutile.loggerfutile.optionsGA4GHclientgenericsGenomeInfoDbGenomeInfoDbDataGenomicAlignmentsGenomicFeaturesGenomicRangesgluehighrhtmltoolshtmlwidgetshttpuvhttrIRangesjquerylibjsonliteKEGGRESTknitrlambda.rlaterlatticelazyevallifecyclemagrittrMatrixMatrixGenericsmatrixStatsmemoisemimeopensslopenxlsxpillarpkgconfigplogrpngpromisespurrrR6rappdirsRcppRCurlrestfulrRhtslibrjsonrlangrmarkdownRsamtoolsRSQLitertracklayerS4ArraysS4VectorssassshinyshinyjsshinythemessnowsourcetoolsSparseArraystringistringrSummarizedExperimentsystibbletidyrtidyselecttinytexUCSC.utilsutf8VariantAnnotationvctrswithrxfunXMLxtableXVectoryamlzipzlibbioc
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Shiny application for interacting with GA4GH-based data servers | GA4GHshiny-package GA4GHshiny |
Open web application | app |
Count genotype | countGenotype |