Package: GA4GHshiny 1.29.0

Welliton Souza

GA4GHshiny: Shiny application for interacting with GA4GH-based data servers

GA4GHshiny package provides an easy way to interact with data servers based on Global Alliance for Genomics and Health (GA4GH) genomics API through a Shiny application. It also integrates with Beacon Network.

Authors:Welliton Souza [aut, cre], Benilton Carvalho [ctb], Cristiane Rocha [ctb], Elizabeth Borgognoni [ctb]

GA4GHshiny_1.29.0.tar.gz
GA4GHshiny_1.29.0.zip(r-4.5)GA4GHshiny_1.29.0.zip(r-4.4)GA4GHshiny_1.29.0.zip(r-4.3)
GA4GHshiny_1.29.0.tgz(r-4.4-any)GA4GHshiny_1.29.0.tgz(r-4.3-any)
GA4GHshiny_1.29.0.tar.gz(r-4.5-noble)GA4GHshiny_1.29.0.tar.gz(r-4.4-noble)
GA4GHshiny_1.29.0.tgz(r-4.4-emscripten)GA4GHshiny_1.29.0.tgz(r-4.3-emscripten)
GA4GHshiny.pdf |GA4GHshiny.html
GA4GHshiny/json (API)

# Install 'GA4GHshiny' in R:
install.packages('GA4GHshiny', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/labbcb/ga4ghshiny/issues

On BioConductor:GA4GHshiny-1.29.0(bioc 3.21)GA4GHshiny-1.28.0(bioc 3.20)

gui

4.60 score 2 stars 3 scripts 217 downloads 2 exports 115 dependencies

Last updated 2 months agofrom:145a45dbe6. Checks:OK: 1 ERROR: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKDec 18 2024
R-4.5-winERRORDec 18 2024
R-4.5-linuxERRORDec 18 2024
R-4.4-winERRORDec 18 2024
R-4.4-macERRORDec 18 2024
R-4.3-winERRORDec 18 2024
R-4.3-macERRORDec 18 2024

Exports:appcountGenotype

Dependencies:abindAnnotationDbiaskpassbase64encBHBiobaseBiocGenericsBiocIOBiocParallelBiostringsbitbit64bitopsblobBSgenomebslibcachemclicodetoolscommonmarkcpp11crayoncrosstalkcurlDBIDelayedArraydigestdplyrDTevaluatefansifastmapfontawesomeformatRfsfutile.loggerfutile.optionsGA4GHclientgenericsGenomeInfoDbGenomeInfoDbDataGenomicAlignmentsGenomicFeaturesGenomicRangesgluehighrhtmltoolshtmlwidgetshttpuvhttrIRangesjquerylibjsonliteKEGGRESTknitrlambda.rlaterlatticelazyevallifecyclemagrittrMatrixMatrixGenericsmatrixStatsmemoisemimeopensslopenxlsxpillarpkgconfigplogrpngpromisespurrrR6rappdirsRcppRCurlrestfulrRhtslibrjsonrlangrmarkdownRsamtoolsRSQLitertracklayerS4ArraysS4VectorssassshinyshinyjsshinythemessnowsourcetoolsSparseArraystringistringrSummarizedExperimentsystibbletidyrtidyselecttinytexUCSC.utilsutf8VariantAnnotationvctrswithrxfunXMLxtableXVectoryamlzipzlibbioc

GA4GHshiny

Rendered fromGA4GHshiny.Rmdusingknitr::rmarkdownon Dec 18 2024.

Last update: 2017-10-11
Started: 2017-05-06