Package: GA4GHshiny 1.29.0

Welliton Souza

GA4GHshiny: Shiny application for interacting with GA4GH-based data servers

GA4GHshiny package provides an easy way to interact with data servers based on Global Alliance for Genomics and Health (GA4GH) genomics API through a Shiny application. It also integrates with Beacon Network.

Authors:Welliton Souza [aut, cre], Benilton Carvalho [ctb], Cristiane Rocha [ctb], Elizabeth Borgognoni [ctb]

GA4GHshiny_1.29.0.tar.gz
GA4GHshiny_1.29.0.zip(r-4.5)GA4GHshiny_1.29.0.zip(r-4.4)GA4GHshiny_1.29.0.zip(r-4.3)
GA4GHshiny_1.29.0.tgz(r-4.5-any)GA4GHshiny_1.29.0.tgz(r-4.4-any)GA4GHshiny_1.29.0.tgz(r-4.3-any)
GA4GHshiny_1.29.0.tar.gz(r-4.5-noble)GA4GHshiny_1.29.0.tar.gz(r-4.4-noble)
GA4GHshiny_1.29.0.tgz(r-4.4-emscripten)GA4GHshiny_1.29.0.tgz(r-4.3-emscripten)
GA4GHshiny.pdf |GA4GHshiny.html
GA4GHshiny/json (API)

# Install 'GA4GHshiny' in R:
install.packages('GA4GHshiny', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/labbcb/ga4ghshiny/issues

On BioConductor:GA4GHshiny-1.29.0(bioc 3.21)GA4GHshiny-1.28.0(bioc 3.20)

gui

4.60 score 2 stars 3 scripts 242 downloads 2 exports 114 dependencies

Last updated 4 months agofrom:145a45dbe6. Checks:1 OK, 7 ERROR. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 16 2025
R-4.5-winERRORFeb 16 2025
R-4.5-macERRORFeb 16 2025
R-4.5-linuxERRORFeb 16 2025
R-4.4-winERRORFeb 16 2025
R-4.4-macERRORFeb 16 2025
R-4.3-winERRORFeb 16 2025
R-4.3-macERRORFeb 16 2025

Exports:appcountGenotype

Dependencies:abindAnnotationDbiaskpassbase64encBHBiobaseBiocGenericsBiocIOBiocParallelBiostringsbitbit64bitopsblobBSgenomebslibcachemclicodetoolscommonmarkcpp11crayoncrosstalkcurlDBIDelayedArraydigestdplyrDTevaluatefansifastmapfontawesomeformatRfsfutile.loggerfutile.optionsGA4GHclientgenericsGenomeInfoDbGenomeInfoDbDataGenomicAlignmentsGenomicFeaturesGenomicRangesgluehighrhtmltoolshtmlwidgetshttpuvhttrIRangesjquerylibjsonliteKEGGRESTknitrlambda.rlaterlatticelazyevallifecyclemagrittrMatrixMatrixGenericsmatrixStatsmemoisemimeopensslopenxlsxpillarpkgconfigplogrpngpromisespurrrR6rappdirsRcppRCurlrestfulrRhtslibrjsonrlangrmarkdownRsamtoolsRSQLitertracklayerS4ArraysS4VectorssassshinyshinyjsshinythemessnowsourcetoolsSparseArraystringistringrSummarizedExperimentsystibbletidyrtidyselecttinytexUCSC.utilsutf8VariantAnnotationvctrswithrxfunXMLxtableXVectoryamlzip

GA4GHshiny

Rendered fromGA4GHshiny.Rmdusingknitr::rmarkdownon Feb 16 2025.

Last update: 2017-10-11
Started: 2017-05-06