Package: DELocal 1.13.0

Rishi Das Roy

DELocal: Identifies differentially expressed genes with respect to other local genes

The goal of DELocal is to identify DE genes compared to their neighboring genes from the same chromosomal location. It has been shown that genes of related functions are generally very far from each other in the chromosome. DELocal utilzes this information to identify DE genes comparing with their neighbouring genes.

Authors:Rishi Das Roy [aut, cre]

DELocal_1.13.0.tar.gz
DELocal_1.13.0.zip(r-4.7)DELocal_1.13.0.zip(r-4.6)DELocal_1.13.0.zip(r-4.5)
DELocal_1.13.0.tgz(r-4.6-any)DELocal_1.13.0.tgz(r-4.5-any)
DELocal_1.13.0.tar.gz(r-4.7-any)DELocal_1.13.0.tar.gz(r-4.6-any)
DELocal_1.13.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
DELocal/json (API)
NEWS

# Install 'DELocal' in R:
install.packages('DELocal', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/dasroy/delocal/issues

On BioConductor:DELocal-1.13.0(bioc 3.24)DELocal-1.12.0(bioc 3.23)

geneexpressiondifferentialexpressionrnaseqtranscriptomics

4.78 score 1 packages 4 scripts 306 downloads 2 exports 59 dependencies

Last updated from:0616957671. Checks:1 NOTE, 9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksNOTE175
linux-devel-x86_64OK308
source / vignettesOK270
linux-release-x86_64OK297
macos-release-arm64OK185
macos-oldrel-arm64OK158
windows-develOK257
windows-releaseOK257
windows-oldrelOK228
wasm-releaseOK144

Exports:DELocalplotNeighbourhood

Dependencies:abindBHBiobaseBiocGenericsBiocParallelclicodetoolscpp11DelayedArrayDESeq2dplyrfarverformatRfutile.loggerfutile.optionsgenericsGenomicRangesggplot2gluegtableIRangesisobandlabelinglambda.rlatticelifecyclelimmalocfitmagrittrMatrixMatrixGenericsmatrixStatspillarpkgconfigplyrR6RColorBrewerRcppRcppArmadilloreshape2rlangS4ArraysS4VectorsS7scalesSeqinfosnowSparseArraystatmodstringistringrSummarizedExperimenttibbletidyselectutf8vctrsviridisLitewithrXVector

DELocal

Rendered fromDELocal.Rmdusingknitr::rmarkdownon May 28 2026.

Last update: 2026-03-12
Started: 2023-03-27