Package: DELocal 1.5.0
Rishi Das Roy
DELocal: Identifies differentially expressed genes with respect to other local genes
The goal of DELocal is to identify DE genes compared to their neighboring genes from the same chromosomal location. It has been shown that genes of related functions are generally very far from each other in the chromosome. DELocal utilzes this information to identify DE genes comparing with their neighbouring genes.
Authors:
DELocal_1.5.0.tar.gz
DELocal_1.5.0.zip(r-4.5)DELocal_1.5.0.zip(r-4.4)DELocal_1.5.0.zip(r-4.3)
DELocal_1.5.0.tgz(r-4.4-any)DELocal_1.5.0.tgz(r-4.3-any)
DELocal_1.5.0.tar.gz(r-4.5-noble)DELocal_1.5.0.tar.gz(r-4.4-noble)
DELocal_1.5.0.tgz(r-4.4-emscripten)DELocal_1.5.0.tgz(r-4.3-emscripten)
DELocal.pdf |DELocal.html✨
DELocal/json (API)
NEWS
| # Install 'DELocal' in R: |
| install.packages('DELocal', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/dasroy/delocal/issues
On BioConductor:DELocal-1.5.0(bioc 3.20)DELocal-1.4.0(bioc 3.19)
Last updated 2 months agofrom:9f8de40e8b
Exports:DELocalplotNeighbourhood
Dependencies:abindaskpassBHBiobaseBiocGenericsBiocParallelclicodetoolscolorspacecpp11crayoncurlDelayedArrayDESeq2dplyrfansifarverformatRfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesggplot2gluegtablehttrIRangesisobandjsonlitelabelinglambda.rlatticelifecyclelimmalocfitmagrittrMASSMatrixMatrixGenericsmatrixStatsmgcvmimemunsellnlmeopensslpillarpkgconfigplyrR6RColorBrewerRcppRcppArmadilloreshape2rlangS4ArraysS4VectorsscalessnowSparseArraystatmodstringistringrSummarizedExperimentsystibbletidyselectUCSC.utilsutf8vctrsviridisLitewithrXVectorzlibbioc
