CoSIA, an R package for Cross Species Investigation and Analysis
Summary | Installation | Generating a CoSIAn object | Load CoSIA | Arguments and options table | Find possible tissues with getTissues | Initializing a CoSIAn object | Use Cases with Monogenic Kidney Disease-Associated Genes | Use Case #1: Converting Gene Symbols to Ensembl IDs (getConversion) | Use Case #2: Obtaining and visualizing curated non-diseased kidney and heart gene expression data for human, mouse, rat from Bgee | Use Case #3: Gene expression variability across species for kidney tissue by calculating and visualizing median-based Coefficient of Variation (CV) | Use Case #4: Gene expression diversity and specificity across tissues and species for monogenic kidney-disease associated genes
Rendered fromCoSIA_Intro.Rmdusingknitr::rmarkdown