Package: CGEN 3.43.0
Justin Lee
CGEN: An R package for analysis of case-control studies in genetic epidemiology
This is a package for analysis of case-control data in genetic epidemiology. It provides a set of statistical methods for evaluating gene-environment (or gene-genes) interactions under multiplicative and additive risk models, with or without assuming gene-environment (or gene-gene) independence in the underlying population.
Authors:
CGEN_3.43.0.tar.gz
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CGEN.pdf |CGEN.html✨
CGEN/json (API)
NEWS
| # Install 'CGEN' in R: |
| install.packages('CGEN', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
- LocusMapData - Locus map data
- Xdata - Sample covariate and outcome data
- Xdata2 - Sample covariate and outcome data
On BioConductor:CGEN-3.41.0(bioc 3.20)CGEN-3.40.0(bioc 3.19)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
snpmultiplecomparisonclustering
Last updated 23 days agofrom:a8ad56a538. Checks:OK: 1 WARNING: 7 NOTE: 1. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 30 2024 |
| R-4.5-win-x86_64 | WARNING | Oct 30 2024 |
| R-4.5-linux-x86_64 | WARNING | Oct 30 2024 |
| R-4.4-win-x86_64 | WARNING | Oct 30 2024 |
| R-4.4-mac-x86_64 | WARNING | Oct 30 2024 |
| R-4.4-mac-aarch64 | WARNING | Oct 30 2024 |
| R-4.3-win-x86_64 | NOTE | Oct 30 2024 |
| R-4.3-mac-x86_64 | WARNING | Oct 30 2024 |
| R-4.3-mac-aarch64 | WARNING | Oct 30 2024 |
Exports:additive.testgetMatchedSetsgetSummarygetWaldTestGxE.scanGxE.scan.combineGxE.scan.partitionManhattan.plotprintEffectsQQ.plotsnp.effectssnp.effects.plotsnp.logisticsnp.matchedsnp.score
