Introduction | Citing this work | Package installation | Creating a new workflow document | Using RStudio and our template | Working outside RStudio | Converting to LaTeX and PDF | Article upload | R session information | Acknowledgements and funding
Package: BiocWorkflowTools 1.39.0
Mike Smith
BiocWorkflowTools: Tools to aid the development of Bioconductor Workflow packages
Provides functions to ease the transition between Rmarkdown and LaTeX documents when authoring a Bioconductor Workflow.
Authors:
BiocWorkflowTools_1.39.0.tar.gz
BiocWorkflowTools_1.39.0.zip(r-4.7)BiocWorkflowTools_1.39.0.zip(r-4.6)BiocWorkflowTools_1.39.0.zip(r-4.5)
BiocWorkflowTools_1.39.0.tgz(r-4.6-any)BiocWorkflowTools_1.39.0.tgz(r-4.5-any)
BiocWorkflowTools_1.39.0.tar.gz(r-4.7-any)BiocWorkflowTools_1.39.0.tar.gz(r-4.6-any)
BiocWorkflowTools_1.39.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
BiocWorkflowTools/json (API)
| # Install 'BiocWorkflowTools' in R: |
| install.packages('BiocWorkflowTools', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:BiocWorkflowTools-1.39.0(bioc 3.24)BiocWorkflowTools-1.38.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:25b5471b70. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 157 | ||
| linux-devel-x86_64 | NOTE | 164 | ||
| source / vignettes | OK | 169 | ||
| linux-release-x86_64 | NOTE | 151 | ||
| macos-release-arm64 | NOTE | 85 | ||
| macos-oldrel-arm64 | NOTE | 98 | ||
| windows-devel | NOTE | 73 | ||
| windows-release | NOTE | 71 | ||
| windows-oldrel | NOTE | 111 | ||
| wasm-release | OK | 113 |
Exports:createBiocWorkflowf1000_articleuploadToOverleaf
Dependencies:askpassbase64encBiocManagerBiocStylebookdownbslibcachemclicliprcrayoncredentialscurldescdigestevaluatefastmapfontawesomefsgertgit2rgitcredsgluehighrhtmltoolshttrhttr2inijquerylibjsonliteknitrlifecyclemagrittrmemoisemimeopensslpurrrR6rappdirsrlangrmarkdownrprojrootrstudioapisassstringistringrsystinytexusethisvctrswhiskerwithrxfunyamlzip
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Create a New Bioconductor Workflow Package | createBiocWorkflow |
| F1000Research article format | f1000_article |
| Upload a LaTeX project to Overleaf | uploadToOverleaf |
