Package: BERT 1.1.0
![](https://r-universe.dev/static/nobody.jpg)
Yannis Schumann
BERT: Hierarchical Batch-Effect Adjustment with Trees
Provides efficient batch-effect adjustment of data with missing values. BERT orders all batch effect correction to a tree of pairwise computations. BERT allows parallelization over sub-trees.
Authors:
BERT_1.1.0.tar.gz
BERT_1.1.0.zip(r-4.5)BERT_1.1.0.zip(r-4.4)BERT_1.1.0.zip(r-4.3)
BERT_1.1.0.tgz(r-4.4-any)BERT_1.1.0.tgz(r-4.3-any)
BERT_1.1.0.tar.gz(r-4.5-noble)BERT_1.1.0.tar.gz(r-4.4-noble)
BERT_1.1.0.tgz(r-4.4-emscripten)BERT_1.1.0.tgz(r-4.3-emscripten)
BERT.pdf |BERT.html✨
BERT/json (API)
NEWS
# Install 'BERT' in R: |
install.packages('BERT', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/hsu-hpc/bert/issues
On BioConductor:BERT-1.1.0(bioc 3.20)BERT-1.0.0(bioc 3.19)
Last updated 2 months agofrom:17da2e9759
Exports:BERTcompute_aswcount_existinggenerate_data_covariablesgenerate_dataset
Dependencies:abindannotateAnnotationDbiaskpassBHBiobaseBiocGenericsBiocParallelBiostringsbitbit64blobcachemcliclustercodetoolscomprehenrcpp11crayoncurlDBIDelayedArraydplyredgeRfansifastmapforeachformatRfutile.loggerfutile.optionsgenefiltergenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesgluehmshttrinvgammaIRangesiteratorsjanitorjsonliteKEGGRESTlambda.rlatticelifecyclelimmalocfitlogginglubridatemagrittrMatrixMatrixGenericsmatrixStatsmemoisemgcvmimenlmeopensslpillarpkgconfigplogrpngpurrrR6RcpprlangRSQLiteS4ArraysS4VectorssnakecasesnowSparseArraystatmodstringistringrSummarizedExperimentsurvivalsvasystibbletidyrtidyselecttimechangeUCSC.utilsutf8vctrswithrXMLxtableXVectorzlibbioc