Package: BADER 1.45.0
Andreas Neudecker
BADER: Bayesian Analysis of Differential Expression in RNA Sequencing Data
For RNA sequencing count data, BADER fits a Bayesian hierarchical model. The algorithm returns the posterior probability of differential expression for each gene between two groups A and B. The joint posterior distribution of the variables in the model can be returned in the form of posterior samples, which can be used for further down-stream analyses such as gene set enrichment.
Authors:
BADER_1.45.0.tar.gz
BADER_1.45.0.zip(r-4.5)BADER_1.45.0.zip(r-4.4)BADER_1.45.0.zip(r-4.3)
BADER_1.45.0.tgz(r-4.4-x86_64)BADER_1.45.0.tgz(r-4.4-arm64)BADER_1.45.0.tgz(r-4.3-x86_64)BADER_1.45.0.tgz(r-4.3-arm64)
BADER_1.45.0.tar.gz(r-4.5-noble)BADER_1.45.0.tar.gz(r-4.4-noble)
BADER_1.45.0.tgz(r-4.4-emscripten)BADER_1.45.0.tgz(r-4.3-emscripten)
BADER.pdf |BADER.html✨
BADER/json (API)
| # Install 'BADER' in R: |
| install.packages('BADER', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:BADER-1.45.0(bioc 3.21)BADER-1.44.0(bioc 3.20)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
immunooncologysequencingrnaseqdifferentialexpressionsoftwaresagecpp
Last updated 2 months agofrom:2798fff8ee. Checks:OK: 1 NOTE: 8. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 29 2024 |
| R-4.5-win-x86_64 | NOTE | Nov 29 2024 |
| R-4.5-linux-x86_64 | NOTE | Nov 29 2024 |
| R-4.4-win-x86_64 | NOTE | Nov 29 2024 |
| R-4.4-mac-x86_64 | NOTE | Nov 29 2024 |
| R-4.4-mac-aarch64 | NOTE | Nov 29 2024 |
| R-4.3-win-x86_64 | NOTE | Nov 29 2024 |
| R-4.3-mac-x86_64 | NOTE | Nov 29 2024 |
| R-4.3-mac-aarch64 | NOTE | Nov 29 2024 |
Exports:BADER
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Bayesian Analysis of RNA Sequencing Data | BADER |