Package: Anaquin 2.37.0

Ted Wong

Anaquin: Statistical analysis of sequins

The project is intended to support the use of sequins (synthetic sequencing spike-in controls) owned and made available by the Garvan Institute of Medical Research. The goal is to provide a standard open source library for quantitative analysis, modelling and visualization of spike-in controls.

Authors:Ted Wong

Anaquin_2.37.0.tar.gz
Anaquin_2.37.0.zip(r-4.7)Anaquin_2.37.0.zip(r-4.6)Anaquin_2.37.0.zip(r-4.5)
Anaquin_2.37.0.tgz(r-4.6-any)Anaquin_2.37.0.tgz(r-4.5-any)
Anaquin_2.37.0.tar.gz(r-4.7-any)Anaquin_2.37.0.tar.gz(r-4.6-any)
Anaquin_2.37.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
Anaquin/json (API)
NEWS

# Install 'Anaquin' in R:
install.packages('Anaquin', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On BioConductor:Anaquin-2.37.0(bioc 3.24)Anaquin-2.36.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

immunooncologydifferentialexpressionpreprocessingrnaseqgeneexpressionsoftware

4.69 score 49 scripts 420 downloads 5 exports 63 dependencies

Last updated from:aa820db8f9. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR137
linux-devel-x86_64NOTE197
source / vignettesOK209
linux-release-x86_64NOTE206
macos-release-arm64NOTE116
macos-oldrel-arm64NOTE122
windows-develNOTE119
windows-releaseNOTE157
windows-oldrelNOTE118
wasm-releaseOK141

Exports:plotConjointplotLinearplotLODplotLogisticplotROC

Dependencies:abindBHBiobaseBiocGenericsBiocParallelbitopscaToolsclicodetoolscpp11DelayedArrayDESeq2evaluatefarverformatRfutile.loggerfutile.optionsgenericsGenomicRangesggplot2gluegplotsgtablegtoolshighrIRangesisobandKernSmoothknitrlabelinglambda.rlatticelifecyclelocfitmagrittrMatrixMatrixGenericsmatrixStatsplyrqvalueR6RColorBrewerRcppRcppArmadilloreshape2rlangROCRS4ArraysS4VectorsS7scalesSeqinfosnowSparseArraystringistringrSummarizedExperimentvctrsviridisLitewithrxfunXVectoryaml

Anaquin - Vignette

Ted Wong ([email protected])

Rendered fromAnaquin.Rmdusingknitr::rmarkdownon May 29 2026.

Last update: 2017-08-08
Started: 2016-08-26