Package: AnVILWorkflow 1.7.1

Sehyun Oh

AnVILWorkflow: Run workflows implemented in Terra/AnVIL workspace

The AnVIL is a cloud computing resource developed in part by the National Human Genome Research Institute. The main cloud-based genomics platform deported by the AnVIL project is Terra. The AnVILWorkflow package allows remote access to Terra implemented workflows, enabling end-user to utilize Terra/ AnVIL provided resources - such as data, workflows, and flexible/scalble computing resources - through the conventional R functions.

Authors:Sehyun Oh [aut, cre], Marcel Ramos [ctb], Kai Gravel-Pucillo [aut]

AnVILWorkflow_1.7.1.tar.gz
AnVILWorkflow_1.7.1.zip(r-4.5)AnVILWorkflow_1.7.1.zip(r-4.4)AnVILWorkflow_1.5.3.zip(r-4.3)
AnVILWorkflow_1.7.1.tgz(r-4.4-any)AnVILWorkflow_1.5.3.tgz(r-4.3-any)
AnVILWorkflow_1.7.1.tar.gz(r-4.5-noble)AnVILWorkflow_1.7.1.tar.gz(r-4.4-noble)
AnVILWorkflow_1.7.1.tgz(r-4.4-emscripten)AnVILWorkflow_1.5.3.tgz(r-4.3-emscripten)
AnVILWorkflow.pdf |AnVILWorkflow.html
AnVILWorkflow/json (API)
NEWS

# Install 'AnVILWorkflow' in R:
install.packages('AnVILWorkflow', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/shbrief/anvilworkflow/issues

On BioConductor:AnVILWorkflow-1.7.1(bioc 3.21)AnVILWorkflow-1.6.0(bioc 3.20)

infrastructuresoftwareanvilgcpterraworkflows

4.88 score 5 stars 1 scripts 112 downloads 18 exports 72 dependencies

Last updated 2 months agofrom:87eb1abb1f. Checks:ERROR: 1 WARNING: 4 NOTE: 2. Indexed: yes.

TargetResultDate
Doc / VignettesFAILNov 29 2024
R-4.5-winWARNINGNov 29 2024
R-4.5-linuxWARNINGNov 29 2024
R-4.4-winWARNINGNov 29 2024
R-4.4-macWARNINGNov 29 2024
R-4.3-winNOTESep 22 2024
R-4.3-macNOTESep 22 2024

Exports:AnVILBrowseavailableAnalysiscloneWorkspacecurrentInputfindInputNamegetAllDataTablesgetAllWorkflowsgetDashboardgetDatagetOutputgetWorkflowConfiggetWorkflowsgetWorkspacesmonitorWorkflowrunWorkflowsetCloudEnvstopWorkflowupdateInput

Dependencies:AnVILAnVILBaseAnVILGCPaskpassbase64encBiocBaseUtilsbslibcachemclicommonmarkcpp11crayoncrosstalkcurldigestdplyrDTevaluatefansifastmapfontawesomeformatRfsfutile.loggerfutile.optionsgenericsgluehighrhtmltoolshtmlwidgetshttpuvhttrhttr2jquerylibjsonliteknitrlambda.rlaterlazyevallifecyclemagrittrmemoisemimeminiUIopensslpillarpkgconfigplyrpromisespurrrR6rapiclientrappdirsRcpprlangrmarkdownsassshinysourcetoolsstringistringrsystibbletidyrtidyselecttinytexutf8vctrswithrxfunxtableyaml