Package: AnVILWorkflow 1.7.4

Sehyun Oh

AnVILWorkflow: Run workflows implemented in Terra/AnVIL workspace

The AnVIL is a cloud computing resource developed in part by the National Human Genome Research Institute. The main cloud-based genomics platform deported by the AnVIL project is Terra. The AnVILWorkflow package allows remote access to Terra implemented workflows, enabling end-user to utilize Terra/ AnVIL provided resources - such as data, workflows, and flexible/scalble computing resources - through the conventional R functions.

Authors:Sehyun Oh [aut, cre], Marcel Ramos [ctb], Kai Gravel-Pucillo [aut]

AnVILWorkflow_1.7.4.tar.gz
AnVILWorkflow_1.7.4.zip(r-4.5)AnVILWorkflow_1.7.4.zip(r-4.4)
AnVILWorkflow_1.7.4.tgz(r-4.5-any)AnVILWorkflow_1.7.4.tgz(r-4.4-any)
AnVILWorkflow_1.7.4.tar.gz(r-4.5-noble)AnVILWorkflow_1.7.4.tar.gz(r-4.4-noble)
AnVILWorkflow_1.7.4.tgz(r-4.4-emscripten)
AnVILWorkflow.pdf |AnVILWorkflow.html✨
AnVILWorkflow/json (API)
NEWS

# Install 'AnVILWorkflow' in R:
install.packages('AnVILWorkflow', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/shbrief/anvilworkflow/issues

On BioConductor:AnVILWorkflow-1.7.4(bioc 3.21)AnVILWorkflow-1.6.0(bioc 3.20)

infrastructuresoftwareanvilgcpterraworkflows

5.95 score 6 stars 1 scripts 156 downloads 18 exports 72 dependencies

Last updated 1 months agofrom:ec32a08ab9. Checks:1 OK, 6 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 20 2025
R-4.5-winNOTEMar 20 2025
R-4.5-macNOTEMar 20 2025
R-4.5-linuxNOTEMar 20 2025
R-4.4-winNOTEMar 20 2025
R-4.4-macNOTEMar 20 2025
R-4.4-linuxNOTEMar 20 2025

Exports:AnVILBrowseavailableAnalysiscloneWorkspacecurrentInputfindInputNamegetAllDataTablesgetAllWorkflowsgetDashboardgetDatagetOutputgetWorkflowConfiggetWorkflowsgetWorkspacesmonitorWorkflowrunWorkflowsetCloudEnvstopWorkflowupdateInput

Dependencies:AnVILAnVILBaseAnVILGCPaskpassbase64encBiocBaseUtilsbslibcachemclicommonmarkcpp11crayoncrosstalkcurldigestdplyrDTevaluatefansifastmapfontawesomeformatRfsfutile.loggerfutile.optionsgenericsgluehighrhtmltoolshtmlwidgetshttpuvhttrhttr2jquerylibjsonliteknitrlambda.rlaterlazyevallifecyclemagrittrmemoisemimeminiUIopensslpillarpkgconfigplyrpromisespurrrR6rapiclientrappdirsRcpprlangrmarkdownsassshinysourcetoolsstringistringrsystibbletidyrtidyselecttinytexutf8vctrswithrxfunxtableyaml

AnVILWorkflow: Run batch analysis workflows including non-R tools leveraing Cloud resources

Sehyun Oh

Rendered fromsalmon.Rmdusingknitr::rmarkdownon Mar 20 2025.

Last update: 2025-02-11
Started: 2022-10-08