Package: AgiMicroRna 2.55.0
![](https://r-universe.dev/static/nobody.jpg)
Pedro Lopez-Romero
AgiMicroRna: Processing and Differential Expression Analysis of Agilent microRNA chips
Processing and Analysis of Agilent microRNA data
Authors:
AgiMicroRna_2.55.0.tar.gz
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AgiMicroRna.pdf |AgiMicroRna.html✨
AgiMicroRna/json (API)
# Install 'AgiMicroRna' in R: |
install.packages('AgiMicroRna', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
- dd.micro - Data example
- ddPROC - Processed miRNA data
- targets.micro - Example of target file
On BioConductor:AgiMicroRna-2.55.0(bioc 3.20)AgiMicroRna-2.54.0(bioc 3.19)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 months agofrom:15a2ac5941
Exports:basicLimmaboxplotMicroRnacvArrayesetMicroRnafilterMicroRnagetDecideTestsHeatMapMicroRnahierclusMicroRnamvaBASICmvaMicroRnaPCAplotMicroRnaplotDensityMicroRnapvalHistogramqcPlotsreadMicroRnaAFEreadTargetsRleMicroRnarmaMicroRnashowsignificantMicroRnatgsMicroRnatgsNormalizationwriteEset
Dependencies:abindaffyaffycoretoolsaffyioannotateAnnotationDbiAnnotationFilterAnnotationForgeaskpassbackportsbase64encBHBiobaseBiocFileCacheBiocGenericsBiocIOBiocManagerBiocParallelbiomaRtBiostringsbiovizBasebitbit64bitopsblobbroombroom.helpersBSgenomebslibcachemCategorycaToolscheckmateclicliprclustercodetoolscolorspacecpp11crayoncurldata.tableDBIdbplyrDelayedArrayDESeq2dichromatdigestdplyredgeRensembldbevaluatefansifarverfastmapfffilelockfontawesomeforcatsforeachforeignformatRFormulafsfutile.loggerfutile.optionsgcrmagenefiltergenericsGenomeInfoDbGenomeInfoDbDataGenomicAlignmentsGenomicFeaturesGenomicRangesGGallyggbioggplot2ggstatsGlimmaglueGO.dbGOstatsgplotsgraphgridExtraGSEABasegtablegtoolshavenhighrHmischmshtmlTablehtmltoolshtmlwidgetshttrhttr2hwriterIRangesisobanditeratorsjquerylibjsonliteKEGGRESTKernSmoothknitrlabelinglabelledlambda.rlatticelazyevallifecyclelimmalocfitmagrittrMASSMatrixMatrixGenericsmatrixStatsmemoisemgcvmimemunsellnlmennetoligoClassesopensslOrganismDbipatchworkPFAM.dbpillarpkgconfigplogrplyrpngpreprocessCoreprettyunitsprogressProtGenericspurrrR.methodsS3R.ooR.utilsR6rappdirsRBGLRColorBrewerRcppRcppArmadilloRCurlreadrReportingToolsreshape2restfulrRgraphvizRhtslibrjsonrlangrmarkdownrpartRsamtoolsRSQLiterstudioapirtracklayerS4ArraysS4VectorssassscalessnowSparseArraystatmodstringistringrSummarizedExperimentsurvivalsystibbletidyrtidyselecttinytextxdbmakertzdbUCSC.utilsutf8VariantAnnotationvctrsviridisviridisLitevroomwithrxfunXMLxml2xtableXVectoryamlzlibbioc