Package: ASEB 1.51.0
Likun Wang
ASEB: Predict Acetylated Lysine Sites
ASEB is an R package to predict lysine sites that can be acetylated by a specific KAT-family.
Authors:
ASEB_1.51.0.tar.gz
ASEB_1.51.0.zip(r-4.5)ASEB_1.51.0.zip(r-4.4)ASEB_1.51.0.zip(r-4.3)
ASEB_1.51.0.tgz(r-4.4-x86_64)ASEB_1.51.0.tgz(r-4.4-arm64)ASEB_1.51.0.tgz(r-4.3-x86_64)ASEB_1.51.0.tgz(r-4.3-arm64)
ASEB_1.51.0.tar.gz(r-4.5-noble)ASEB_1.51.0.tar.gz(r-4.4-noble)
ASEB_1.51.0.tgz(r-4.4-emscripten)ASEB_1.51.0.tgz(r-4.3-emscripten)
ASEB.pdf |ASEB.html✨
ASEB/json (API)
NEWS
| # Install 'ASEB' in R: |
| install.packages('ASEB', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:ASEB-1.49.0(bioc 3.20)ASEB-1.48.0(bioc 3.19)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 25 days agofrom:951d21635c. Checks:OK: 1 NOTE: 4 WARNING: 4. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 30 2024 |
| R-4.5-win-x86_64 | NOTE | Oct 30 2024 |
| R-4.5-linux-x86_64 | NOTE | Oct 30 2024 |
| R-4.4-win-x86_64 | NOTE | Oct 30 2024 |
| R-4.4-mac-x86_64 | WARNING | Oct 30 2024 |
| R-4.4-mac-aarch64 | WARNING | Oct 30 2024 |
| R-4.3-win-x86_64 | NOTE | Oct 30 2024 |
| R-4.3-mac-x86_64 | WARNING | Oct 30 2024 |
| R-4.3-mac-aarch64 | WARNING | Oct 30 2024 |
Exports:asebProteinsasebSitesdrawEScurvedrawStatreadSequenceSequenceInfo
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| prediction of all lysine sites on a specific protein that can be acetylated | asebProteins asebProteins,character,character,character-method asebProteins,SequenceInfo,SequenceInfo,SequenceInfo-method |
| prediction of lysine sites that can be acetylated | asebSites asebSites,character,character,character-method asebSites,SequenceInfo,SequenceInfo,SequenceInfo-method |
| draw Enriment Score curves for specific sites | drawEScurve drawEScurve,data.frame-method |
| draw P-values and enrichment scores for all lysine sites on a specific protein | drawStat drawStat,data.frame-method |
| read sequences from file | readSequence |
| "SequenceInfo" class | SequenceInfo |