Package: rDGIdb 1.31.1

Lars Bosshard

rDGIdb: R Wrapper for DGIdb

The rDGIdb package provides a wrapper for the Drug Gene Interaction Database (DGIdb). For simplicity, the wrapper query function and output resembles the user interface and results format provided on the DGIdb website (https://www.dgidb.org/).

Authors:Thomas Thurnherr, Franziska Singer, Daniel J. Stekhoven, and Niko Beerenwinkel

rDGIdb_1.31.1.tar.gz
rDGIdb_1.31.1.zip(r-4.5)rDGIdb_1.31.1.zip(r-4.4)rDGIdb_1.31.1.zip(r-4.3)
rDGIdb_1.31.1.tgz(r-4.4-any)rDGIdb_1.31.1.tgz(r-4.3-any)
rDGIdb_1.31.1.tar.gz(r-4.5-noble)rDGIdb_1.31.1.tar.gz(r-4.4-noble)
rDGIdb_1.31.1.tgz(r-4.4-emscripten)rDGIdb_1.31.1.tgz(r-4.3-emscripten)
rDGIdb.pdf |rDGIdb.html✨
rDGIdb/json (API)
NEWS

# Install 'rDGIdb' in R:
install.packages('rDGIdb', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:rDGIdb-1.31.0(bioc 3.20)rDGIdb-1.30.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

10 exports 1.24 score 8 dependencies 7 mentions

Last updated 20 days agofrom:477185d4e7

Exports:byGenedetailedResultsgeneCategoriesinteractionTypesplotInteractionsBySourcequeryDGIdbresourceVersionsresultSummarysearchTermSummarysourceDatabases

Dependencies:askpasscurlhttrjsonlitemimeopensslR6sys

Readme and manuals

Help Manual

Help pageTopics
Interactions by sourceplotInteractionsBySource
Query DGIdb using RqueryDGIdb
Filter options for rDGIdb queries.geneCategories interactionTypes rDGIdbFilters sourceDatabases
Result object of a rDGIdb querybyGene byGene,rDGIdbResult-method detailedResults detailedResults,rDGIdbResult-method new,rDGIdbResult-method rDGIdbResult rDGIdbResult-class resultSummary resultSummary,rDGIdbResult-method searchTermSummary searchTermSummary,rDGIdbResult-method
Version numbers of DGIdb resourcesresourceVersions