Package: nondetects 2.43.0

Valeriia Sherina

nondetects: Non-detects in qPCR data

Methods to model and impute non-detects in the results of qPCR experiments.

Authors:Matthew N. McCall <[email protected]>, Valeriia Sherina <[email protected]>

nondetects_2.43.0.tar.gz
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manual.pdf |manual.html✨
card.svg |card.png
nondetects/json (API)
NEWS

# Install 'nondetects' in R:
install.packages('nondetects', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • nature2008 - The qPCR data from McMurray _et al._ Nature 2008.
  • oncogene2013 - The qPCR data from Sampson _et al._ Oncogene 2013.
  • sagmb2011 - The qPCR data from Almudevar _et al._ SAGMB 2011.

On BioConductor:nondetects-2.43.0(bioc 3.24)nondetects-2.42.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

softwareassaydomaingeneexpressiontechnologyqpcrworkflowsteppreprocessing

3.88 score 19 scripts 345 downloads 2 mentions 1 exports 34 dependencies

Last updated from:630fd19582. Checks:1 ERROR, 9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR154
linux-devel-x86_64OK383
source / vignettesOK257
linux-release-x86_64OK340
macos-release-arm64OK239
macos-oldrel-arm64OK339
windows-develOK362
windows-releaseOK310
windows-oldrelOK307
wasm-releaseOK111

Exports:qpcrImpute

Dependencies:abindaffyaffyioarmBiobaseBiocGenericsBiocManagerbitopsbootcaToolscodagenericsgplotsgtoolsHTqPCRKernSmoothlatticelimmalme4MASSMatrixminqamvtnormnlmenloptrpreprocessCorerbibutilsRColorBrewerRcppRcppEigenRdpackreformulasrlangstatmod

Non-detects in qPCR data: methods to model and impute non-detects in the results of qPCR experiments (nondetects)

Valeriia Sherina, Matthew N. McCall

Rendered fromnondetects.Rmdusingknitr::knitron May 30 2026.

Last update: 2017-12-21
Started: 2015-11-09