Package: biodbKegg 1.11.0

Pierrick Roger

biodbKegg: biodbKegg, a library for connecting to the KEGG Database

The biodbKegg library is an extension of the biodb framework package that provides access to the KEGG databases Compound, Enzyme, Genes, Module, Orthology and Reaction. It allows to retrieve entries by their accession numbers. Web services like "find", "list" and "findExactMass" are also available. Some functions for navigating along the pathways have also been implemented.

Authors:Pierrick Roger [aut, cre]

biodbKegg_1.11.0.tar.gz
biodbKegg_1.11.0.zip(r-4.5)biodbKegg_1.11.0.zip(r-4.4)biodbKegg_1.11.0.zip(r-4.3)
biodbKegg_1.11.0.tgz(r-4.4-any)biodbKegg_1.11.0.tgz(r-4.3-any)
biodbKegg_1.11.0.tar.gz(r-4.5-noble)biodbKegg_1.11.0.tar.gz(r-4.4-noble)
biodbKegg_1.11.0.tgz(r-4.4-emscripten)biodbKegg_1.11.0.tgz(r-4.3-emscripten)
biodbKegg.pdf |biodbKegg.html
biodbKegg/json (API)
NEWS

# Install 'biodbKegg' in R:
install.packages('biodbKegg', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/pkrog/biodbkegg/issues

On BioConductor:biodbKegg-1.11.0(bioc 3.20)biodbKegg-1.10.0(bioc 3.19)

bioconductor-package

21 exports 0.61 score 71 dependencies

Last updated 2 months agofrom:2d13b7313b

Exports:KeggCircleKeggCompoundConnKeggCompoundEntryKeggConnKeggEntryKeggEnzymeConnKeggEnzymeEntryKeggGenesConnKeggGenesEntryKeggGlycanConnKeggGlycanEntryKeggModuleConnKeggModuleEntryKeggOrthologyConnKeggOrthologyEntryKeggPathwayConnKeggPathwayEntryKeggReactionConnKeggReactionEntryKeggRectKeggShape

Dependencies:askpassBiocFileCachebiodbbitbit64bitopsblobbriocachemcallrchkclicpp11crayoncurlDBIdbplyrdescdiffobjdigestdplyrevaluatefansifastmapfilelockfsgenericsgit2rgluehmshttrjsonlitelgrlifecyclemagrittrmemoisemimeopensslpillarpkgbuildpkgconfigpkgloadplogrplyrpraiseprettyunitsprocessxprogresspspurrrR6rappdirsRcppRCurlrematch2rlangrprojrootRSQLitestringistringrsystestthattibbletidyrtidyselectutf8vctrswaldowithrXMLyaml

An introduction to biodbKegg

Rendered frombiodbKegg.Rmdusingknitr::rmarkdownon Jun 13 2024.

Last update: 2021-10-13
Started: 2021-10-12