Package: alabaster.string 1.5.0

Aaron Lun

alabaster.string: Save and Load Biostrings to/from File

Save Biostrings objects to file artifacts, and load them back into memory. This is a more portable alternative to serialization of such objects into RDS files. Each artifact is associated with metadata for further interpretation; downstream applications can enrich this metadata with context-specific properties.

Authors:Aaron Lun [aut, cre]

alabaster.string_1.5.0.tar.gz
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alabaster.string_1.5.0.tgz(r-4.4-any)alabaster.string_1.5.0.tgz(r-4.3-any)
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alabaster.string.pdf |alabaster.string.html
alabaster.string/json (API)

# Install 'alabaster.string' in R:
install.packages('alabaster.string', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:alabaster.string-1.5.0(bioc 3.20)alabaster.string-1.4.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

4 exports 1.16 score 26 dependencies 2 dependents

Last updated 2 months agofrom:a4cf6fd280

Exports:loadXStringSetreadXStringSetsaveObjectstageObject

Dependencies:alabaster.basealabaster.schemasaskpassBiocGenericsBiostringscrayoncurlGenomeInfoDbGenomeInfoDbDatahttrIRangesjsonlitejsonvalidatemimeopensslR6Rcpprhdf5rhdf5filtersRhdf5libS4VectorssysUCSC.utilsV8XVectorzlibbioc

Saving XStringSets to artifacts and back again

Rendered fromuserguide.Rmdusingknitr::rmarkdownon Jun 30 2024.

Last update: 2023-12-27
Started: 2022-09-23

Readme and manuals

Help Manual

Help pageTopics
Read an XStringSet from disk.loadXStringSet readXStringSet
Save a XStringSet to disksaveObject,XStringSet-method stageObject,XStringSet-method