Package: alabaster.mae 1.5.0

Aaron Lun

alabaster.mae: Load and Save MultiAssayExperiments

Save MultiAssayExperiments into file artifacts, and load them back into memory. This is a more portable alternative to serialization of such objects into RDS files. Each artifact is associated with metadata for further interpretation; downstream applications can enrich this metadata with context-specific properties.

Authors:Aaron Lun [aut, cre]

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alabaster.mae.pdf |alabaster.mae.html
alabaster.mae/json (API)

# Install 'alabaster.mae' in R:
install.packages('alabaster.mae', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:alabaster.mae-1.5.0(bioc 3.20)alabaster.mae-1.4.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

4 exports 1.00 score 62 dependencies 1 dependents

Last updated 2 months agofrom:3ad081d0d8

Exports:loadMultiAssayExperimentreadMultiAssayExperimentsaveObjectstageObject

Dependencies:abindalabaster.basealabaster.matrixalabaster.rangesalabaster.schemasalabaster.seaskpassBiobaseBiocBaseUtilsBiocGenericsclicpp11crayoncurlDelayedArraydplyrfansigenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesglueHDF5ArrayhttrIRangesjsonlitejsonvalidatelatticelifecyclemagrittrMatrixMatrixGenericsmatrixStatsmimeMultiAssayExperimentopensslpillarpkgconfigpurrrR6Rcpprhdf5rhdf5filtersRhdf5librlangS4ArraysS4VectorsSparseArraystringistringrSummarizedExperimentsystibbletidyrtidyselectUCSC.utilsutf8V8vctrswithrXVectorzlibbioc

Saving MultiAssayExperiments to artifacts and back again

Rendered fromuserguide.Rmdusingknitr::rmarkdownon Jun 20 2024.

Last update: 2023-12-26
Started: 2022-09-22

Readme and manuals

Help Manual

Help pageTopics
Read a MultiAssayExperiment from diskloadMultiAssayExperiment readMultiAssayExperiment
Save a MultiAssayExperimentsaveObject,MultiAssayExperiment-method stageObject,MultiAssayExperiment-method