Package: alabaster.bumpy 1.5.0

Aaron Lun

alabaster.bumpy: Save and Load BumpyMatrices to/from file

Save BumpyMatrix objects into file artifacts, and load them back into memory. This is a more portable alternative to serialization of such objects into RDS files. Each artifact is associated with metadata for further interpretation; downstream applications can enrich this metadata with context-specific properties.

Authors:Aaron Lun [cre, aut]

alabaster.bumpy_1.5.0.tar.gz
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alabaster.bumpy.pdf |alabaster.bumpy.html
alabaster.bumpy/json (API)

# Install 'alabaster.bumpy' in R:
install.packages('alabaster.bumpy', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:alabaster.bumpy-1.5.0(bioc 3.20)alabaster.bumpy-1.4.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

5 exports 0.91 score 16 dependencies 1 dependents

Last updated 2 months agofrom:109be1e056

Exports:loadBumpyDataFrameMatrixreadBumpyDataFrameMatrixsaveObjectstageObjectuseBumpyHDF5

Dependencies:alabaster.basealabaster.schemasBiocGenericsBumpyMatrixcurlIRangesjsonlitejsonvalidatelatticeMatrixRcpprhdf5rhdf5filtersRhdf5libS4VectorsV8

Saving BumpyMatrices to file

Rendered fromuserguide.Rmdusingknitr::rmarkdownon Jun 30 2024.

Last update: 2024-01-01
Started: 2022-09-26

Readme and manuals

Help Manual

Help pageTopics
Read a BumpyDataFrameMatrix from diskloadBumpyDataFrameMatrix readBumpyDataFrameMatrix
Save a BumpyDataFrameMatrix to disksaveObject,BumpyDataFrameMatrix-method stageObject,BumpyDataFrameMatrix-method
Save BumpyMatrix data to HDF5useBumpyHDF5