Package: BREW3R.r 1.1.1

Lucille Lopez-Delisle

BREW3R.r: R package associated to BREW3R

This R package provide functions that are used in the BREW3R workflow. This mainly contains a function that extend a gtf as GRanges using information from another gtf (also as GRanges). The process allows to extend gene annotation without increasing the overlap between gene ids.

Authors:Lucille Lopez-Delisle [aut, cre]

BREW3R.r_1.1.1.tar.gz
BREW3R.r_1.1.1.zip(r-4.5)BREW3R.r_1.1.1.zip(r-4.4)BREW3R.r_1.1.1.zip(r-4.3)
BREW3R.r_1.1.1.tgz(r-4.4-any)BREW3R.r_1.1.1.tgz(r-4.3-any)
BREW3R.r_1.1.1.tar.gz(r-4.5-noble)BREW3R.r_1.1.1.tar.gz(r-4.4-noble)
BREW3R.r_1.1.1.tgz(r-4.4-emscripten)BREW3R.r_1.1.1.tgz(r-4.3-emscripten)
BREW3R.r.pdf |BREW3R.r.html✨
BREW3R.r/json (API)
NEWS

# Install 'BREW3R.r' in R:
install.packages('BREW3R.r', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/lldelisle/brew3r.r/issues

On BioConductor:BREW3R.r-1.1.1(bioc 3.20)BREW3R.r-1.0.1(bioc 3.19)

bioconductor-package

1 exports 0.61 score 18 dependencies

Last updated 2 months agofrom:b3093da30f

Exports:extend_granges

Dependencies:askpassBiocGenericscurlGenomeInfoDbGenomeInfoDbDataGenomicRangeshttrIRangesjsonlitemimeopensslR6rlangS4VectorssysUCSC.utilsXVectorzlibbioc

BREW3R.r

Lucille Lopez-Delisle

Rendered fromBREW3R.r.Rmdusingknitr::rmarkdownon Jun 14 2024.

Last update: 2024-04-03
Started: 2024-02-21