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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "xCell2" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'xCell2: A Tool for Generic Cell Type Enrichment Analysis'
version: 0.99.107
doi: 10.1101/2024.09.06.611424
abstract: xCell2 provides methods for cell type enrichment analysis using cell type
  signatures. It includes three main functions - 1. xCell2Train for training custom
  references objects from bulk or single-cell RNA-seq datasets. 2. xCell2Analysis
  for conducting the cell type enrichment analysis using the custom reference. 3.
  xCell2GetLineage for identifying dependencies between different cell types using
  ontology.
authors:
- family-names: Angel
  given-names: Almog
  email: almog.angel@campus.technion.ac.il
  orcid: https://orcid.org/0009-0001-3297-6935
- family-names: Aran
  given-names: Dvir
  email: dviraran@technion.ac.il
  orcid: https://orcid.org/0000-0001-6334-5039
preferred-citation:
  type: article
  title: 'xCell 2.0: Robust Algorithm for Cell Type Proportion Estimation Predicts
    Response to Immune Checkpoint Blockade'
  authors:
  - family-names: Angel
    given-names: Almog
    email: almog.angel@campus.technion.ac.il
    orcid: https://orcid.org/0009-0001-3297-6935
  - family-names: Aran
    given-names: Dvir
    email: dviraran@technion.ac.il
    orcid: https://orcid.org/0000-0001-6334-5039
  journal: bioRxiv
  year: '2024'
  doi: 10.1101/2024.09.06.611424
  url: https://doi.org/10.1101/2024.09.06.611424
repository: https://bioc.r-universe.dev
repository-code: https://github.com/AlmogAngel/xCell2
commit: 8f2d48ebf6c25bcd6cd3112ee50ecd2e6ad1aa62
url: https://github.com/AlmogAngel/xCell2
contact:
- family-names: Angel
  given-names: Almog
  email: almog.angel@campus.technion.ac.il
  orcid: https://orcid.org/0009-0001-3297-6935