Package: wpm
Type: Package
Title: Well Plate Maker
Version: 1.23.0
Authors@R: c(person('Helene', 'Borges', role = c('aut', 'cre'), 
                    email = 'borges.helene.sophie@gmail.com'),
            person('Thomas', 'Burger', role = 'aut',
                    email = 'thomas.burger@cea.fr'))
Description: The Well-Plate Maker (WPM) is a shiny application deployed
        as an R package. Functions for a command-line/script use are
        also available. The WPM allows users to generate well plate
        maps to carry out their experiments while improving the
        handling of batch effects. In particular, it helps controlling
        the "plate effect" thanks to its ability to randomize samples
        over multiple well plates. The algorithm for placing the
        samples is inspired by the backtracking algorithm: the samples
        are placed at random while respecting specific spatial
        constraints.
License: Artistic-2.0
biocViews: GUI, Proteomics, MassSpectrometry, BatchEffect,
        ExperimentalDesign
Depends: R (>= 4.1.0)
Imports: utils, methods, cli, Biobase, SummarizedExperiment, config,
        golem, shiny, DT, ggplot2, dplyr, rlang, stringr,
        shinydashboard, shinyWidgets, shinycustomloader, RColorBrewer,
        logging
Encoding: UTF-8
LazyData: false
RoxygenNote: 7.1.1
Suggests: MSnbase, testthat, BiocStyle, knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
URL: https://github.com/HelBor/wpm,
        https://bioconductor.org/packages/release/bioc/html/wpm.html
BugReports: https://github.com/HelBor/wpm/issues
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:53:09 UTC
RemoteUrl: https://github.com/bioc/wpm
RemoteRef: HEAD
RemoteSha: 46b4d1a2032fcfd2e5dce3fe221832efd9ba29f3
Packaged: 2026-07-03 23:18:04 UTC; root
Author: Helene Borges [aut, cre],
  Thomas Burger [aut]
Maintainer: Helene Borges <borges.helene.sophie@gmail.com>