# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "variancePartition" in publications use:'
type: software
license: GPL-2.0-only
title: 'variancePartition: Quantify and interpret drivers of variation in multilevel
  gene expression experiments'
version: 1.35.4
doi: 10.1101/2023.03.17.533005
abstract: Quantify and interpret multiple sources of biological and technical variation
  in gene expression experiments. Uses a linear mixed model to quantify variation
  in gene expression attributable to individual, tissue, time point, or technical
  variables. Includes dream differential expression analysis for repeated measures.
authors:
- family-names: Hoffman
  given-names: Gabriel
  email: gabriel.hoffman@mssm.edu
  orcid: https://orcid.org/0000-0002-0957-0224
preferred-citation:
  type: article
  title: Efficient differential expression analysis of large-scale single cell transcriptomics
    data using dreamlet
  authors:
  - family-names: Hoffman
    given-names: Gabriel E.
  - family-names: al.
    given-names: et
  year: '2023'
  journal: bioRxiv
  doi: 10.1101/2023.03.17.533005
repository: https://bioc.r-universe.dev
repository-code: https://github.com/DiseaseNeuroGenomics/variancePartition
url: http://bioconductor.org/packages/variancePartition
date-released: '2024-06-13'
contact:
- family-names: Hoffman
  given-names: Gabriel
  email: gabriel.hoffman@mssm.edu
  orcid: https://orcid.org/0000-0002-0957-0224
references:
- type: article
  title: 'dream: Powerful differential expression analysis for repeated measures designs'
  authors:
  - family-names: Hoffman
    given-names: Gabriel E.
  - family-names: Roussos
    given-names: Panos
  year: '2020'
  journal: Bioinformatics
  doi: 10.1093/bioinformatics/btaa687
- type: article
  title: 'variancePartition: Interpreting drivers of variation in complex gene expression
    studies'
  authors:
  - family-names: Hoffman
    given-names: Gabriel E.
  - family-names: Schadt
    given-names: Eric E.
  year: '2016'
  journal: BMC Bioinformatics
  doi: 10.1186/s12859-016-1323-z
  volume: '17'
  issue: '483'
identifiers:
- type: url
  value: https://DiseaseNeuroGenomics.github.io/variancePartition