# -------------------------------------------- # CITATION file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # -------------------------------------------- cff-version: 1.2.0 message: 'To cite package "trigger" in publications use:' type: software license: GPL-3.0-only title: 'trigger: Transcriptional Regulatory Inference from Genetics of Gene ExpRession' version: 1.51.0 abstract: 'This R package provides tools for the statistical analysis of integrative genomic data that involve some combination of: genotypes, high-dimensional intermediate traits (e.g., gene expression, protein abundance), and higher-order traits (phenotypes). The package includes functions to: (1) construct global linkage maps between genetic markers and gene expression; (2) analyze multiple-locus linkage (epistasis) for gene expression; (3) quantify the proportion of genome-wide variation explained by each locus and identify eQTL hotspots; (4) estimate pair-wise causal gene regulatory probabilities and construct gene regulatory networks; and (5) identify causal genes for a quantitative trait of interest.' authors: - family-names: Storey given-names: John D. email: jstorey@princeton.edu - family-names: Chen given-names: Lin S. email: lchen@health.bsd.uchicago.edu - family-names: Sangurdekar given-names: Dipen P. email: dps@genomics.princeton.edu repository: https://bioc.r-universe.dev date-released: '2015-04-17' contact: - family-names: Storey given-names: John D. email: jstorey@princeton.edu