Please cite the following if utilizing Transite: Konstantin Krismer, Molly A. Bird, Shohreh Varmeh, Erika D. Handly, Anna Gattinger,Thomas Bernwinkler, Daniel A. Anderson, Andreas Heinzel, Brian A. Joughin, Yi Wen Kong, Ian G. Cannell, and Michael B. Yaffe Transite: A computational motif-based analysis platform that identifies RNA-binding proteins modulating changes in gene expression Cell Reports, Volume 32, Issue 8, 108064, DOI: https://doi.org/10.1016/j.celrep.2020.108064 A BibTeX entry for LaTeX users is @Article{, author = {Konstantin Krismer and Molly A. Bird and Shohreh Varmeh and Erika D. Handly and Anna Gattinger and Thomas Bernwinkler and Daniel A. Anderson and Andreas Heinzel and Brian A. Joughin and Yi Wen Kong and Ian G. Cannell and Michael B. Yaffe}, title = {Transite: A computational motif-based analysis platform that identifies RNA-binding proteins modulating changes in gene expression}, year = {2020}, volume = {32}, doi = {10.1016/j.celrep.2020.108064}, publisher = {Elsevier}, url = {https://doi.org/10.1016/j.celrep.2020.108064}, journal = {Cell Reports}, } This free open-source software implements academic research by the authors and co-workers. If you use it, please support the project by citing the appropriate article.