Package: transformGamPoi
Type: Package
Title: Variance Stabilizing Transformation for Gamma-Poisson Models
Version: 1.19.0
Authors@R: person("Constantin", "Ahlmann-Eltze", email = "artjom31415@googlemail.com", 
               role = c("aut", "cre"), comment = c(ORCID = "0000-0002-3762-068X"))
Description: Variance-stabilizing transformations help with the
        analysis of heteroskedastic data (i.e., data where the variance
        is not constant, like count data). This package provide two
        types of variance stabilizing transformations: (1) methods
        based on the delta method (e.g., 'acosh', 'log(x+1)'), (2)
        model residual based (Pearson and randomized quantile
        residuals).
BugReports: https://github.com/const-ae/transformGamPoi/issues
URL: https://github.com/const-ae/transformGamPoi
License: GPL-3
Encoding: UTF-8
Imports: glmGamPoi, DelayedArray, Matrix, MatrixGenerics,
        SummarizedExperiment, HDF5Array, methods, utils, Rcpp
Suggests: testthat, TENxPBMCData, scran, knitr, rmarkdown, BiocStyle
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.2
Config/testthat/edition: 3
biocViews: SingleCell, Normalization, Preprocessing, Regression
VignetteBuilder: knitr
LinkingTo: Rcpp
Config/pak/sysreqs: libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:56:55 UTC
RemoteUrl: https://github.com/bioc/transformGamPoi
RemoteRef: HEAD
RemoteSha: 65fe01422d2b16e669dbb1937db98427c1957539
NeedsCompilation: yes
Packaged: 2026-06-23 20:33:50 UTC; root
Author: Constantin Ahlmann-Eltze [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-3762-068X>)
Maintainer: Constantin Ahlmann-Eltze <artjom31415@googlemail.com>