Changes in version 1.30.0 BUG FIXES o RSQLite 1.1 compatibility update Changes in version 1.24.2 BUG FIXES o R-3.2.4 compatibility update Changes in version 1.24.1 BUG FIXES o Fix target ranking when data have no variances Changes in version 1.16.1 o More informative error messages Changes in version 1.14.1 BUG FIXES o Various fixes for non-cascade ODE model (i.e. model not using TF mRNA data) (thanks to Andrea Ocone for the report) Changes in version 1.12.0 o Minor speed optimisation o Minor documentation reorganisation and updates Changes in version 1.8.0 NEW FEATURES o Direct support for variances for Illumina Bead Array data from lumi. o Prettier default plot style BUG FIXES o Fix to variance scaling in plots of models with TF mRNA measurements Changes in version 1.6.1 (2011-04-26) BUG FIXES o Fix: target ranking now works with >= 10 known targets (thanks to Jake Michaelson for the report) Changes in version 1.6.0 o Function documentation updates Changes in version 1.4.2 (2011-02-14) o Fix scoreList::sort when including NA values o Fixes for working with non-Affymetrix data o New citation information Changes in version 1.4.1 (2011-01-19) o Clarify output from model fitting and remove unnecessary warnings o Minor documentation improvements Changes in version 1.4.0 o Easier access to untransformed parameter values and other usability fixes o Add functionality to introduce priors to parameters o More sensible length scale bounds Changes in version 1.3.2 (2010-10-08) o Add database export for tigreBrowser o Make kernel computation numerically more robust Changes in version 1.2.1 (2010-09-20) o Fix baseline log-likelihood computation o Robustify against genes with constant zero expression o Fix package name in data files o Documentation and citation information updates Changes in version 1.2.0 o Same as 1.0.0, due to version numbering glitch Changes in version 1.0.0 (2010-04-22) o Documentation and citation information updates. Changes in version 0.9.4 (2010-04-12) o Rename the package to tigre to avoid a clash with a package in CRAN. Changes in version 0.9.3 (2010-04-07) o Make GPPlot more robust against numerical problems. o Fixes to GPRankTFs etc. Changes in version 0.9.2 (2010-04-01) o Initial version in Bioconductor.